RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ZNF12P17014 697 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 TKTP29401 623 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 TOB1P50616 345 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 YWHAGP61981 247 aaKnown RBP eCLIP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 SULT2A1Q06520 285 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 ITGADQ13349 1161 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 DSTYKQ6XUX3 929 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 LBX2Q6XYB7 198 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 TAS2R42Q7RTR8 314 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 NET1Q7Z628 596 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 DHDDSQ86SQ9 333 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 RHPN2Q8IUC4 686 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 GUF1Q8N442 669 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF507Q8TCN5 953 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 SLC7A3Q8WY07 619 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 LARP4BQ92615 738 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 TRIM63Q969Q1 353 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 ZBED3Q96IU2 234 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 PACSIN1Q9BY11 444 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 DNAI2Q9GZS0 605 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 MANSC1Q9H8J5 431 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 ADGRA3Q8IWK6 1321 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 MYO7AQ13402 2215 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 C1orf232A0A0U1RR37 186 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 COPEO14579 308 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 MEIS2O14770 477 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 PQBP1O60828 265 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 VCLP18206 1134 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 PEX3P56589 373 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 XIAPP98170 497 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 OTUD4Q01804 1114 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 SPIDRQ14159 915 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 ACSBG2Q5FVE4 666 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 C7orf31Q8N865 590 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 FNDC8Q8TC99 324 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 PYROXD1Q8WU10 500 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 ALKBH8Q96BT7 664 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 MKNK1Q9BUB5 465 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 GPRC5CQ9NQ84 441 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 CREBZFQ9NS37 354 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 SLC9A2Q9UBY0 812 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 PRKAG3Q9UGI9 489 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 GABRQQ9UN88 632 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 NAALADL1Q9UQQ1 740 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 TMEM98Q9Y2Y6 226 aa7.06□□□□□ -1.28
TGFBR3-209ENST00000532540 MYPNQ86TC9 1320 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 CENPFP49454 3210 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 A0A0G2JLL6 359 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 GOLGA8IPA6NC78 632 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 GOLGA8JA6NMD2 632 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 TBKBP1A7MCY6 615 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 FCHO1O14526 889 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 TOM1L1O75674 476 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 TTC4O95801 387 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 RARBP10826 455 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 JAK1P23458 1154 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 ANXA13P27216 316 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 KCNJ1P48048 391 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 STAT5BP51692 787 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 GALCP54803 685 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 FKBP1BP68106 108 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 TRIM32Q13049 653 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 TKFCQ3LXA3 575 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 SPOUT1Q5T280 376 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 PPP1R18Q6NYC8 613 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 RIPOR1Q6ZS17 1223 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 PRRT2Q7Z6L0 340 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 SLFN12Q8IYM2 578 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 CHST13Q8NET6 341 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 CFAP36Q96G28 342 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 POLR3CQ9BUI4 534 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 ADAM33Q9BZ11 813 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 OSBPL6Q9BZF3 934 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 NEUROG2Q9H2A3 272 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 PXMP2Q9NR77 195 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 STK17AQ9UEE5 414 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 ZNF214Q9UL59 606 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 ASB14A6NK59 587 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 K7ENM7 598 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 FBP2O00757 339 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 ATP9BO43861 1147 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 TLR2O60603 784 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 NPM3O75607 178 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 MAPK4P31152 587 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 TCF7P36402 384 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 MXI1P50539 228 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 AP3B2Q13367 1082 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 ART3Q13508 389 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 NR1D2Q14995 579 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 TBCCQ15814 346 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 FSCBQ5H9T9 825 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 IZUMO3Q5VZ72 239 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 EGFLAMQ63HQ2 1017 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 APTXQ7Z2E3 356 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 UBE2Q1Q7Z7E8 422 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 FAM178BQ8IXR5 827 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 EXOC8Q8IYI6 725 aa7.05□□□□□ -1.28
TGFBR3-209ENST00000532540 SIX6OS1Q8N1H7 587 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms