RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 RNPEPQ9H4A4 650 aa3.46□□□□□ -1.86
CD44-234ENST00000531873 EPS8L2Q9H6S3 715 aa3.46□□□□□ -1.86
CD44-234ENST00000531873 SAYSD1Q9NPB0 183 aa3.46□□□□□ -1.86
CD44-234ENST00000531873 ZSCAN32Q9NX65 697 aa3.46□□□□□ -1.86
CD44-234ENST00000531873 KIF17Q9P2E2 1029 aa3.46□□□□□ -1.86
CD44-234ENST00000531873 IFT80Q9P2H3 777 aaPredicted RBP3.46□□□□□ -1.86
CD44-234ENST00000531873 FBXO9Q9UK97 447 aaPredicted RBP3.46□□□□□ -1.86
CD44-234ENST00000531873 ZFR2Q9UPR6 939 aaKnown RBP3.46□□□□□ -1.86
CD44-234ENST00000531873 USP15Q9Y4E8 981 aaPredicted RBP3.46□□□□□ -1.86
CD44-234ENST00000531873 A0A1W2PS29 197 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 FAM90A18PA6NE21 464 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 FAM90A16PA6NEW6 464 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 HMX3A6NHT5 357 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 MARCH11A6NNE9 402 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 FAM90A9PA6NNJ1 464 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 CAPN14A8MX76 684 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 FAM90A5PA8MXJ8 464 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 E7ENX8 843 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 H0Y3Z8 333 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 J3KTA2 159 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 TOR1BO14657 336 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 EPB41L2O43491 1005 aaKnown RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 CBFA2T3O75081 653 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 COQ9O75208 318 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 FAM90A15PP0C7V4 464 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 FAM90A14PP0C7W9 464 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 HGFP14210 728 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 PPIFP30405 207 aaKnown RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 NTSR1P30989 418 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 HTR7P34969 479 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 CNR2P34972 360 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 DDIT3P35638 169 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 LIFRP42702 1097 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 NDUFV1P49821 464 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 ANXA11P50995 505 aaKnown RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 CCR5P51681 352 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 ALDH18A1P54886 795 aaKnown RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 TAP2Q03519 686 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 SCAPQ12770 1279 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 DDX10Q13206 875 aaKnown RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 TAF12Q16514 161 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 TBC1D10BQ4KMP7 808 aaPredicted RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 TTC22Q5TAA0 569 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 ARHGAP40Q5TG30 622 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 VPS53Q5VIR6 699 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 B3GNTL1Q67FW5 361 aaPredicted RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 RGS7BPQ6MZT1 257 aaPredicted RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 RETSATQ6NUM9 610 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 LAYNQ6UX15 382 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 C1orf122Q6ZSJ8 110 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 Q6ZSN1 163 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 POLNQ7Z5Q5 900 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 HEATR4Q86WZ0 1026 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 RASGRP3Q8IV61 690 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 ZNF808Q8N4W9 903 aaPredicted RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 ESX1Q8N693 406 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 RSC1A1Q92681 617 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 MNTQ99583 582 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 PTDSS2Q9BVG9 487 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 SSBP3Q9BWW4 388 aaPredicted RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 REXO4Q9GZR2 422 aaKnown RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 TWSG1Q9GZX9 223 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 GBA2Q9HCG7 927 aaPredicted RBP3.45□□□□□ -1.86
CD44-234ENST00000531873 RIC8AQ9NPQ8 531 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 WASH6PQ9NQA3 447 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 HELLSQ9NRZ9 838 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 DNAJB11Q9UBS4 358 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 DAPP1Q9UN19 280 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 SSX2IPQ9Y2D8 614 aa3.45□□□□□ -1.86
CD44-234ENST00000531873 PRAMEF33A0A0G2JMD5 474 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 AHRRA9YTQ3 701 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 HMGB1P1B2RPK0 211 aaPredicted RBP3.44□□□□□ -1.86
CD44-234ENST00000531873 PRAMEF10O60809 474 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 TAF5LO75529 589 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 GPANK1O95872 356 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 VIPP01282 170 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 CD4P01730 458 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 LMNAP02545 664 aaKnown RBP3.44□□□□□ -1.86
CD44-234ENST00000531873 TK1P04183 234 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 ITGALP20701 1170 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 ADORA2AP29274 412 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 AKT1P31749 480 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 NPTX2P47972 431 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 RXRGP48443 463 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 TUBP50607 506 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 SCNN1GP51170 649 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 PRKAG1P54619 331 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 BCAT1P54687 386 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 POLE2P56282 527 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 TIAL1Q01085 375 aaKnown RBP eCLIP3.44□□□□□ -1.86
CD44-234ENST00000531873 SP2Q02086 613 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 FOXD4Q12950 439 aaPredicted RBP3.44□□□□□ -1.86
CD44-234ENST00000531873 G3BP1Q13283 466 aaKnown RBP eCLIP3.44□□□□□ -1.86
CD44-234ENST00000531873 ADCK5Q3MIX3 580 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 CD300EQ496F6 205 aaPredicted RBP3.44□□□□□ -1.86
CD44-234ENST00000531873 RBM20Q5T481 1227 aaKnown RBP3.44□□□□□ -1.86
CD44-234ENST00000531873 MAMDC4Q6UXC1 1216 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 MAATS1Q7Z4T9 603 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 MAPKAPK5Q8IW41 473 aa3.44□□□□□ -1.86
CD44-234ENST00000531873 ADGRG5Q8IZF4 528 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms