RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CATSPERGQ6ZRH7 1159 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 RFX8Q6ZV50 586 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 MICALCLQ6ZW33 695 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 MICU3Q86XE3 530 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 SDR16C5Q8N3Y7 309 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 DCBLD1Q8N8Z6 715 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 FANCBQ8NB91 859 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 NAXEQ8NCW5 288 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 CYP2W1Q8TAV3 490 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 ZSCAN31Q96LW9 406 aaPredicted RBP5.16□□□□□ -1.58
USP47-211ENST00000531513 GDF15Q99988 308 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 SORBS1Q9BX66 1292 aaKnown RBP5.16□□□□□ -1.58
USP47-211ENST00000531513 ZNF518BQ9C0D4 1074 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 DACT1Q9NYF0 836 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 LRFN1Q9P244 771 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 ARPP21Q9UBL0 812 aaPredicted RBP5.16□□□□□ -1.58
USP47-211ENST00000531513 MAN2B2Q9Y2E5 1009 aa5.16□□□□□ -1.58
USP47-211ENST00000531513 MTO1Q9Y2Z2 717 aaKnown RBP5.16□□□□□ -1.58
USP47-211ENST00000531513 CLCA1A8K7I4 914 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 J3KRW8 73 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 SYT5O00445 386 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 PTK2BQ14289 1009 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 SPARCL1Q14515 664 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 GEN1Q17RS7 908 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 INTS11Q5TA45 600 aaKnown RBP5.15□□□□□ -1.59
USP47-211ENST00000531513 FOXR2Q6PJQ5 311 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 ZNF788Q6ZQV5 615 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 UNC13DQ70J99 1090 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 RNF44Q7L0R7 432 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 C1QL2Q7Z5L3 287 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 LNX2Q8N448 690 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 IL17RDQ8NFM7 739 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 SSH3Q8TE77 659 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 SLC29A3Q9BZD2 475 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 PAXBP1Q9Y5B6 917 aa5.15□□□□□ -1.59
USP47-211ENST00000531513 ARHGEF17Q96PE2 2063 aaPredicted RBP5.15□□□□□ -1.59
USP47-211ENST00000531513 RRN3P2A6NIE6 340 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 PRSS29PA6NIE9 313 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 ACKR2O00590 384 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 GRM6O15303 877 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 IRAK2O43187 625 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 HSP90AA1P07900 732 aaKnown RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 MTHFD1P11586 935 aaKnown RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 MYL4P12829 197 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 TNFAIP3P21580 790 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 ZNF81P51508 661 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 NOMO3P69849 1222 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 IRX6P78412 446 aaPredicted RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 SRSF4Q08170 494 aaKnown RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 CTBP1Q13363 440 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 RAB32Q13637 225 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 HABP2Q14520 560 aaPredicted RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 KIF22Q14807 665 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 TAF5Q15542 800 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 ATP2B3Q16720 1220 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 PABPC1LQ4VXU2 614 aaKnown RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 SLC44A4Q53GD3 710 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 HYIQ5T013 277 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 AKNAD1Q5T1N1 836 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 JMJD6Q6NYC1 403 aaPredicted RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 MAATS1Q7Z4T9 603 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 SUGP1Q8IWZ8 645 aaKnown RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 GALNT15Q8N3T1 639 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 USP13Q92995 863 aaPredicted RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 ZNF778Q96MU6 729 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 UROC1Q96N76 676 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 C1QTNF7Q9BXJ2 289 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 C11orf54Q9H0W9 315 aaPredicted RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 SLAMF7Q9NQ25 335 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 HSFX1Q9UBD0 423 aa5.14□□□□□ -1.59
USP47-211ENST00000531513 RGS17Q9UGC6 210 aaPredicted RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 RUVBL1Q9Y265 456 aaKnown RBP5.14□□□□□ -1.59
USP47-211ENST00000531513 PYCARD-AS1I3L0S3 204 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 EIF3FO00303 357 aaPredicted RBP5.13□□□□□ -1.59
USP47-211ENST00000531513 PODXLO00592 558 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 ERN1O75460 977 aaKnown RBP5.13□□□□□ -1.59
USP47-211ENST00000531513 GNAI3P08754 354 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 SBK3P0C264 359 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 CKBP12277 381 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 IL1R1P14778 569 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 GNAI1P63096 354 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 CREMQ03060 361 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 TAF12Q16514 161 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 CCDC93Q567U6 631 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 LCE1AQ5T7P2 110 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 LMBRD2Q68DH5 695 aaPredicted RBP5.13□□□□□ -1.59
USP47-211ENST00000531513 FBXO38Q6PIJ6 1188 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 UBE3BQ7Z3V4 1068 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 COLGALT2Q8IYK4 626 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 VGLL2Q8N8G2 317 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 CHST8Q9H2A9 424 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 BRD9Q9H8M2 597 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 A1CFQ9NQ94 594 aaKnown RBP5.13□□□□□ -1.59
USP47-211ENST00000531513 CFAP97Q9P2B7 532 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 CRYL1Q9Y2S2 319 aa5.13□□□□□ -1.59
USP47-211ENST00000531513 FAM234BA2RU67 622 aa5.12□□□□□ -1.59
USP47-211ENST00000531513 MBD3L4A6NDZ8 208 aaPredicted RBP5.12□□□□□ -1.59
USP47-211ENST00000531513 MBD3L3A6NE82 208 aaPredicted RBP5.12□□□□□ -1.59
USP47-211ENST00000531513 WIPF3A6NGB9 483 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms