RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 KATNAL2Q8IYT4 538 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 C17orf53Q8N3J3 647 aaPredicted RBP8.28□□□□□ -1.08
SORL1-207ENST00000528339 ACTRT1Q8TDG2 376 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 SMARCD1Q96GM5 515 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 TNIP3Q96KP6 325 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 TTPALQ9BTX7 342 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 KMT2EQ8IZD2 1858 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 WASH4PA8MWX3 477 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 OAS1P00973 400 aaKnown RBP8.28□□□□□ -1.08
SORL1-207ENST00000528339 CALB1P05937 261 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 ACRP10323 421 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 ATF2P15336 505 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 RRM1P23921 792 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 TERF1P54274 439 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 AIF1P55008 147 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 SLC6A3Q01959 620 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 TRPC3Q13507 836 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 ARHGAP44Q17R89 818 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 Q6ZNB5 142 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 C7orf61Q8IZ16 206 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 AZIN2Q96A70 460 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 NTAN1Q96AB6 310 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 IRX2Q9BZI1 471 aaPredicted RBP8.28□□□□□ -1.08
SORL1-207ENST00000528339 TRIM7Q9C029 511 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 DNAI2Q9GZS0 605 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 AFF4Q9UHB7 1163 aaKnown RBP8.28□□□□□ -1.08
SORL1-207ENST00000528339 NOD1Q9Y239 953 aa8.28□□□□□ -1.08
SORL1-207ENST00000528339 MDM4O15151 490 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 BUB1BO60566 1050 aaPredicted RBP8.27□□□□□ -1.09
SORL1-207ENST00000528339 H2AFZP0C0S5 128 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 MRPS5P82675 430 aaKnown RBP8.27□□□□□ -1.09
SORL1-207ENST00000528339 BIRC3Q13489 604 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 DRICH1Q6PGQ1 229 aaPredicted RBP8.27□□□□□ -1.09
SORL1-207ENST00000528339 H2AFVQ71UI9 128 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 STRADAQ7RTN6 431 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 ACOT1Q86TX2 421 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 JOSD2Q8TAC2 188 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 SLC2A14Q8TDB8 520 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 ZNF707Q96C28 371 aaPredicted RBP8.27□□□□□ -1.09
SORL1-207ENST00000528339 SMOC2Q9H3U7 446 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 RETREG1Q9H6L5 497 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 SNX12Q9UMY4 172 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 LRRK1Q38SD2 2015 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 LRP4O75096 1905 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 TBKBP1A7MCY6 615 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 ZSCAN12O43309 604 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 PSTPIP1O43586 416 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 RAG1P15918 1043 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 PCSK1P29120 753 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 SLC1A1P43005 524 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 ACADSBP45954 432 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 HDAC4P56524 1084 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 ROR1Q01973 937 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 OVOS1Q6IE37 1185 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 LLGL2Q6P1M3 1020 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 DNAAF5Q86Y56 855 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 SPPL2BQ8TCT7 592 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 ALG3Q92685 438 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 RTP4Q96DX8 246 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 CCDC42Q96M95 316 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 KLHL5Q96PQ7 755 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 PBX4Q9BYU1 374 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.27□□□□□ -1.09
SORL1-207ENST00000528339 CLIC5Q9NZA1 410 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 STRIP2Q9ULQ0 834 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 LRCH4O75427 683 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 FGF18O76093 207 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 FBXO21O94952 628 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 F11P03951 625 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 ALDH2P05091 517 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 USP41Q3LFD5 358 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 CACNA2D4Q7Z3S7 1137 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 TTC9BQ8N6N2 239 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 MRPL43Q8N983 215 aaKnown RBP8.27□□□□□ -1.09
SORL1-207ENST00000528339 CPLX3Q8WVH0 158 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 ZNF558Q96NG5 402 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 SPG21Q9NZD8 308 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 PCDH10Q9P2E7 1040 aa8.27□□□□□ -1.09
SORL1-207ENST00000528339 E5RJQ4 531 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 HUS1O60921 280 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 TCF4P15884 667 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 IL1R2P27930 398 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 USP46P62068 366 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 RPL7AP62424 266 aaKnown RBP8.26□□□□□ -1.09
SORL1-207ENST00000528339 TUBB2AQ13885 445 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 DEFB128Q7Z7B8 93 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 TMEM35BQ8NCS4 154 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 ZNF461Q8TAF7 563 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 FEZF2Q8TBJ5 459 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 CLEC4CQ8WTT0 213 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 TADA1Q96BN2 335 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 TUBB2BQ9BVA1 445 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 S1PR5Q9H228 398 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 TRPV4Q9HBA0 871 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 PARVAQ9NVD7 372 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 JRKLQ9Y4A0 524 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 H7C4K7 107 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 TRIM66O15016 1216 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 HCAR3P49019 387 aa8.26□□□□□ -1.09
SORL1-207ENST00000528339 CXCR3P49682 368 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms