RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 KLK14Q9P0G3 267 aa11.57□□□□□ -0.56
MRPS28-208ENST00000521605 AGO2Q9UKV8 859 aaKnown RBP11.57□□□□□ -0.56
MRPS28-208ENST00000521605 FHOD1Q9Y613 1164 aa11.57□□□□□ -0.56
MRPS28-208ENST00000521605 NOTCH4Q99466 2003 aa11.57□□□□□ -0.56
MRPS28-208ENST00000521605 DSPP15924 2871 aaKnown RBP11.57□□□□□ -0.56
MRPS28-208ENST00000521605 A0A0A6YYK5 440 aaPredicted RBP11.56□□□□□ -0.56
MRPS28-208ENST00000521605 CASTOR2A6NHX0 329 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 LRRIQ4A6NIV6 560 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 NRG2O14511 850 aaPredicted RBP11.56□□□□□ -0.56
MRPS28-208ENST00000521605 RHOP08100 348 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 COL4A2P08572 1712 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 PRLRP16471 622 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 FCARP24071 287 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 OR1D2P34982 312 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 MAGEA1P43355 309 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 PXNP49023 591 aaPredicted RBP11.56□□□□□ -0.56
MRPS28-208ENST00000521605 TCEAL1Q15170 157 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 NAB2Q15742 525 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 TDRD12Q587J7 1177 aaKnown RBP11.56□□□□□ -0.56
MRPS28-208ENST00000521605 FAM78AQ5JUQ0 283 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 CCDC122Q5T0U0 273 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 SRGAP1Q7Z6B7 1085 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 CBWD2Q8IUF1 395 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 GPR65Q8IYL9 337 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 FBXL13Q8NEE6 735 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 PLEKHO2Q8TD55 490 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 BICD1Q96G01 975 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 WDR24Q96S15 920 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 NAPGQ99747 312 aaPredicted RBP11.56□□□□□ -0.56
MRPS28-208ENST00000521605 KIFC3Q9BVG8 833 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
MRPS28-208ENST00000521605 TRIM6Q9C030 488 aaPredicted RBP11.56□□□□□ -0.56
MRPS28-208ENST00000521605 NXF3Q9H4D5 531 aaKnown RBP11.56□□□□□ -0.56
MRPS28-208ENST00000521605 PCIF1Q9H4Z3 704 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 ZFP14Q9HCL3 533 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 LZTFL1Q9NQ48 299 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 PRMT7Q9NVM4 692 aaPredicted RBP11.56□□□□□ -0.56
MRPS28-208ENST00000521605 MRFAP1Q9Y605 127 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 LAMA1P25391 3075 aa11.56□□□□□ -0.56
MRPS28-208ENST00000521605 TMEM8BA6NDV4 472 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 LRRIQ3A6PVS8 624 aaPredicted RBP11.55□□□□□ -0.56
MRPS28-208ENST00000521605 TISP43B9A030 160 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 FANCGO15287 622 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 FAM189A1O60320 539 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 TSPAN1O60635 241 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 EPN2O95208 641 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 KIF4AO95239 1232 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 TRIM49P0CI25 452 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 TRIM49CP0CI26 452 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 CLCN6P51797 869 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 IFI16Q16666 785 aaKnown RBP11.55□□□□□ -0.56
MRPS28-208ENST00000521605 WHAMMP3Q1A5X7 153 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 ZACNQ401N2 412 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 PAPD7Q5XG87 772 aaKnown RBP11.55□□□□□ -0.56
MRPS28-208ENST00000521605 KIAA1211LQ6NV74 962 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 NOTUMQ6P988 496 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 VITQ6UXI7 678 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 KBTBD6Q86V97 674 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 CDR2LQ86X02 465 aaPredicted RBP11.55□□□□□ -0.56
MRPS28-208ENST00000521605 BRSK2Q8IWQ3 736 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 RNF149Q8NC42 400 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 GSTCDQ8NEC7 633 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 PIK3R5Q8WYR1 880 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 ZNF592Q92610 1267 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 TCEAL4Q96EI5 215 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 ACO2Q99798 780 aaKnown RBP11.55□□□□□ -0.56
MRPS28-208ENST00000521605 SCNM1Q9BWG6 230 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 GPR88Q9GZN0 384 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 FAM124BQ9H5Z6 455 aaPredicted RBP11.55□□□□□ -0.56
MRPS28-208ENST00000521605 PTPRHQ9HD43 1115 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 PARP2Q9UGN5 583 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 CDC23Q9UJX2 597 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 DNAJC12Q9UKB3 198 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 TNFSF13BQ9Y275 285 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 GIT1Q9Y2X7 761 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 JRKLQ9Y4A0 524 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 ITPR1Q14643 2758 aa11.55□□□□□ -0.56
MRPS28-208ENST00000521605 SLC38A8A6NNN8 435 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 C4orf47A7E2U8 309 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 EFCAB8A8MWE9 144 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 ABLIM1O14639 778 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 OGTO15294 1046 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 CLDN3O15551 220 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 TACC1O75410 805 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 RPP40O75818 363 aaKnown RBP11.54□□□□□ -0.56
MRPS28-208ENST00000521605 PRKCBP05771 671 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 PLEKP08567 350 aaPredicted RBP11.54□□□□□ -0.56
MRPS28-208ENST00000521605 PSMC3P17980 439 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 MPLP40238 635 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 SOX9P48436 509 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 GCLMP48507 274 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 MFAP3P55082 362 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 DLG4P78352 724 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 PTK2Q05397 1052 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 GRIK3Q13003 919 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 LRRC32Q14392 662 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 DRAP1Q14919 205 aaPredicted RBP11.54□□□□□ -0.56
MRPS28-208ENST00000521605 ZNF569Q5MCW4 686 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 SH3PXD2AQ5TCZ1 1133 aa11.54□□□□□ -0.56
MRPS28-208ENST00000521605 CRELD2Q6UXH1 353 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms