RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 ACTL9Q8TC94 416 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 LRRC8CQ8TDW0 803 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 NSMCE1Q8WV22 266 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 ERP27Q96DN0 273 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 TMEM237Q96Q45 408 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 LRRC37BQ96QE4 947 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 RAB3IPQ96QF0 476 aaPredicted RBP17.73■□□□□ 0.43
LIN54-204ENST00000505397 FDXACB1Q9BRP7 624 aaPredicted RBP17.73■□□□□ 0.43
LIN54-204ENST00000505397 XYLT2Q9H1B5 865 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 LRCH4O75427 683 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 BANF1O75531 89 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 DCTN3O75935 186 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 IFNB1P01574 187 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 VTNP04004 478 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 PROZP22891 400 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 IL1R2P27930 398 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 CTCFP49711 727 aaPredicted RBP17.73■□□□□ 0.43
LIN54-204ENST00000505397 OTUD4Q01804 1114 aaKnown RBP17.73■□□□□ 0.43
LIN54-204ENST00000505397 GAD2Q05329 585 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 MSS51Q4VC12 460 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 FNBP1LQ5T0N5 605 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 ANKRD22Q5VYY1 191 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 CAPN12Q6ZSI9 719 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 ZNF276Q8N554 614 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 NLRP7Q8WX94 980 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 LHX5Q9H2C1 402 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 MINDY3Q9H8M7 445 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 IFT122Q9HBG6 1241 aa17.73■□□□□ 0.43
LIN54-204ENST00000505397 ZWINTO95229 277 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 HOXC6P09630 235 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 RGS2P41220 211 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 CCNG1P51959 295 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 PLCB3Q01970 1234 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 SREBF2Q12772 1141 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 PTPN20Q4JDL3 420 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 PRAMEF19Q5SWL8 479 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 C17orf99Q6UX52 265 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 ANKMY2Q8IV38 441 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 KIAA0319LQ8IZA0 1049 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 LINC01465Q8N7H1 131 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 MAB21L3Q8N8X9 362 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 TTC13Q8NBP0 860 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 INPP5DQ92835 1189 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 TNFSF13BQ9Y275 285 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 HGSO14964 777 aaPredicted RBP17.72■□□□□ 0.43
LIN54-204ENST00000505397 ADCY6O43306 1168 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 WEE2P0C1S8 567 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 T-ENOLP0DO92 83 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 CYP2B6P20813 491 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 LACTBP83111 547 aaPredicted RBP17.72■□□□□ 0.43
LIN54-204ENST00000505397 DENND1BQ6P3S1 775 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 SOCS4Q8WXH5 440 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 ZNF75CPQ92670 426 aaPredicted RBP17.72■□□□□ 0.43
LIN54-204ENST00000505397 ACSS3Q9H6R3 686 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 SAE1Q9UBE0 346 aaPredicted RBP17.72■□□□□ 0.43
LIN54-204ENST00000505397 CYTH4Q9UIA0 394 aa17.72■□□□□ 0.43
LIN54-204ENST00000505397 KRT7P08729 469 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 KRT4P19013 534 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 KDELR1P24390 212 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 PSMA2P25787 234 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 PHBP35232 272 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 ARL4CP56559 192 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 OSTNP61366 133 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 OTOAQ7RTW8 1153 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 TLK2Q86UE8 772 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 CDR2LQ86X02 465 aaPredicted RBP17.71■□□□□ 0.43
LIN54-204ENST00000505397 ATP11CQ8NB49 1132 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 PTPRHQ9HD43 1115 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 CEP83Q9Y592 693 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 GOLGA8SH3BPF8 625 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 GOLGA8MH3BSY2 632 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 TNPO2O14787 897 aaKnown RBP17.71■□□□□ 0.43
LIN54-204ENST00000505397 CST8O60676 142 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 KRT3P12035 628 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 ALDH3A1P30838 453 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 SSTR1P30872 391 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 RPL22P35268 128 aaKnown RBP17.71■□□□□ 0.43
LIN54-204ENST00000505397 SLC8A3P57103 927 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 ATP11AP98196 1134 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 FAM187BQ17R55 369 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 LVRNQ6Q4G3 990 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 IFNLR1Q8IU57 520 aaPredicted RBP17.71■□□□□ 0.43
LIN54-204ENST00000505397 AGGF1Q8N302 714 aaeCLIP17.71■□□□□ 0.43
LIN54-204ENST00000505397 JOSD2Q8TAC2 188 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 PYROXD1Q8WU10 500 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 SLC7A6OSQ96CW6 309 aaPredicted RBP17.71■□□□□ 0.43
LIN54-204ENST00000505397 RSRC1Q96IZ7 334 aaKnown RBP17.71■□□□□ 0.43
LIN54-204ENST00000505397 CDT1Q9H211 546 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 FLRT1Q9NZU1 646 aa17.71■□□□□ 0.43
LIN54-204ENST00000505397 SMAPO00193 183 aa17.71■□□□□ 0.42
LIN54-204ENST00000505397 TRAFD1O14545 582 aaPredicted RBP17.71■□□□□ 0.42
LIN54-204ENST00000505397 TSHRP16473 764 aa17.71■□□□□ 0.42
LIN54-204ENST00000505397 PSMC4P43686 418 aa17.71■□□□□ 0.42
LIN54-204ENST00000505397 YWHAEP62258 255 aaKnown RBP17.71■□□□□ 0.42
LIN54-204ENST00000505397 EFTUD2Q15029 972 aaKnown RBP eCLIP17.71■□□□□ 0.423e-8■■■■■ 41.3
LIN54-204ENST00000505397 HHATQ5VTY9 493 aa17.71■□□□□ 0.42
LIN54-204ENST00000505397 EEF1DP3Q658K8 133 aa17.71■□□□□ 0.42
LIN54-204ENST00000505397 VSIG1Q86XK7 387 aa17.71■□□□□ 0.42
LIN54-204ENST00000505397 ZNF398Q8TD17 642 aa17.71■□□□□ 0.42
LIN54-204ENST00000505397 THOC1Q96FV9 657 aaKnown RBP17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms