RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 COL22A1Q8NFW1 1626 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 DENND3A2RUS2 1198 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 F8W8V4 182 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 SPTLC1O15269 473 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 TM9SF1O15321 606 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 TFAP2AP05549 437 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 CFHP08603 1231 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 VARSP26640 1264 aaKnown RBP11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 BRDTQ58F21 947 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 DARS2Q6PI48 645 aaKnown RBP11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 C14orf80Q86SX3 495 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 MCOLN2Q8IZK6 566 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 FAM156AQ8NDB6 213 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 ZNF398Q8TD17 642 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 APOPT1Q96IL0 206 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 NAP1L4Q99733 375 aaKnown RBP11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 LXNQ9BS40 222 aa11.05□□□□□ -0.64
TRAPPC12-223ENST00000497597 ROBO1Q9Y6N7 1651 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 VILLO15195 856 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 NDUFB5O43674 189 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 TPST1O60507 370 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 TCEA3O75764 348 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 PROSCO94903 275 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 CYP1A2P05177 515 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 OCM2P0CE71 109 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 OCMP0CE72 109 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 SLC5A3P53794 718 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 PSMC5P62195 406 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 CYP4A22Q5TCH4 519 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 TXNRD3NBQ6F5E7 133 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 GAB3Q8WWW8 586 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 SETDB2Q96T68 719 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 TBC1D23Q9NUY8 699 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 CLUHO75153 1309 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 TMEM94Q12767 1356 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 LIASO43766 372 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 UGT1A9O60656 530 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 ZC3H11AO75152 810 aaKnown RBP eCLIP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 RPL10P27635 214 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 KPNA1P52294 538 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 SOX10P56693 466 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 KRT39Q6A163 491 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 DNAJC24Q6P3W2 148 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 C16orf86Q6ZW13 317 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 BANPQ8N9N5 519 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 GABPB2Q8TAK5 448 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 CXorf38Q8TB03 319 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 RIN3Q8TB24 985 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 ALKBH8Q96BT7 664 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 WRNIP1Q96S55 665 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 FAM213AQ9BRX8 229 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 NUF2Q9BZD4 464 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 UGT1A7Q9HAW7 530 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 UGT1A10Q9HAW8 530 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 UGT1A8Q9HAW9 530 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 XAB2Q9HCS7 855 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 ADA2Q9NZK5 511 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 NOCTQ9UK39 431 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 GNEQ9Y223 722 aaKnown RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 POMPQ9Y244 141 aa11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 ZNF335Q9H4Z2 1342 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC12-223ENST00000497597 J3QRK9 145 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 ALOX15BO15296 676 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 TNFAIP8O95379 198 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 ADRB2P07550 413 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 ABHD2P08910 425 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 GMPRP36959 345 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 VCPP55072 806 aaKnown RBP11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 GDF10P55107 478 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 ESRRGP62508 458 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 KRT72Q14CN4 511 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 MORF4L2Q15014 288 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 LGSNQ5TDP6 509 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 HAUS6Q7Z4H7 955 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 DIS3LQ8TF46 1054 aaKnown RBP11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 NLRP7Q8WX94 980 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 FBXL8Q96CD0 374 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 ACCSQ96QU6 501 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 ZNF577Q9BSK1 485 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 RAB6BQ9NRW1 208 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 HNRNPDLO14979 420 aaKnown RBP11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 CRTAMO95727 393 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 APRTP07741 180 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 COL6A2P12110 1019 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 PSMC3P17980 439 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 SLC5A2P31639 672 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 RAP1GDS1P52306 607 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 NFIXQ14938 502 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 SNRNP35Q16560 246 aaKnown RBP11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 CLEC16AQ2KHT3 1053 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 XKR5Q6UX68 686 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 SCARA5Q6ZMJ2 495 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 METTL25Q8N6Q8 603 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 TTC13Q8NBP0 860 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 FBXL13Q8NEE6 735 aa11.03□□□□□ -0.64
TRAPPC12-223ENST00000497597 OLIG1Q8TAK6 271 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms