RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 SMOQ99835 787 aa13.63□□□□□ -0.23
PHF1-210ENST00000488767 CRACR2AQ9BSW2 395 aa13.63□□□□□ -0.23
PHF1-210ENST00000488767 DUSP16Q9BY84 665 aa13.63□□□□□ -0.23
PHF1-210ENST00000488767 UBE2TQ9NPD8 197 aaPredicted RBP13.63□□□□□ -0.23
PHF1-210ENST00000488767 C11orf16Q9NQ32 467 aa13.63□□□□□ -0.23
PHF1-210ENST00000488767 TLR8Q9NR97 1041 aaKnown RBP13.63□□□□□ -0.23
PHF1-210ENST00000488767 NOTCH4Q99466 2003 aa13.63□□□□□ -0.23
PHF1-210ENST00000488767 ZNF840PA6NDX5 716 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 NRG2O14511 850 aaPredicted RBP13.62□□□□□ -0.23
PHF1-210ENST00000488767 CHADO15335 359 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 CDK11BP21127 795 aaKnown RBP13.62□□□□□ -0.23
PHF1-210ENST00000488767 ACO1P21399 889 aaKnown RBP13.62□□□□□ -0.23
PHF1-210ENST00000488767 BCAT1P54687 386 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 USP46P62068 366 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 ZNF268Q14587 947 aaPredicted RBP13.62□□□□□ -0.23
PHF1-210ENST00000488767 MLF2Q15773 248 aaPredicted RBP13.62□□□□□ -0.23
PHF1-210ENST00000488767 GOLGA7BQ2TAP0 167 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 SLC44A4Q53GD3 710 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 FKBP15Q5T1M5 1219 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 C1orf228Q6PIY5 440 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 TRIM65Q6PJ69 517 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 CLEC20AQ6ZU45 233 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 TADA2BQ86TJ2 420 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 DDX42Q86XP3 938 aaKnown RBP eCLIP13.62□□□□□ -0.23
PHF1-210ENST00000488767 ANKRD52Q8NB46 1076 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 RBBP8NLQ8NC74 664 aaPredicted RBP13.62□□□□□ -0.23
PHF1-210ENST00000488767 LMO3Q8TAP4 145 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 SAMSN1Q9NSI8 373 aaKnown RBP13.62□□□□□ -0.23
PHF1-210ENST00000488767 APEX2Q9UBZ4 518 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 MRPS17Q9Y2R5 130 aaKnown RBP13.62□□□□□ -0.23
PHF1-210ENST00000488767 NCANO14594 1321 aa13.62□□□□□ -0.23
PHF1-210ENST00000488767 DOCK6Q96HP0 2047 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 TNFRSF10BO14763 440 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 MED7O43513 233 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 TADA3O75528 432 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 PRAMEF12O95522 483 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 USP8P40818 1118 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 KPNA1P52294 538 aaPredicted RBP13.61□□□□□ -0.23
PHF1-210ENST00000488767 FCHO2Q0JRZ9 810 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 BST2Q10589 180 aaKnown RBP13.61□□□□□ -0.23
PHF1-210ENST00000488767 HECTD3Q5T447 861 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 ASTLQ6HA08 431 aaPredicted RBP13.61□□□□□ -0.23
PHF1-210ENST00000488767 ZNF852Q6ZMS4 543 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 GPIHBP1Q8IV16 184 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 ARHGEF19Q8IW93 802 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 ARHGAP18Q8N392 663 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 ARL14EPQ8N8R7 260 aaPredicted RBP13.61□□□□□ -0.23
PHF1-210ENST00000488767 SCAMP5Q8TAC9 235 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 EXOC4Q96A65 974 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 MSANTD3Q96H12 275 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 PRRX2Q99811 253 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 BPIFA3Q9BQP9 254 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 PLA2G2FQ9BZM2 168 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 UBXN6Q9BZV1 441 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 SMG9Q9H0W8 520 aaKnown RBP13.61□□□□□ -0.23
PHF1-210ENST00000488767 TRPV5Q9NQA5 729 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 TMEM30AQ9NV96 361 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 TSPAN16Q9UKR8 245 aa13.61□□□□□ -0.23
PHF1-210ENST00000488767 TRIOO75962 3097 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 C2orf78A6NCI8 922 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 SMTNL1A8MU46 457 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 MAN2B1O00754 1011 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 BEST1O76090 585 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 SETSIPP0DME0 302 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 GLULP15104 373 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 PSEN1P49768 467 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 TUBP50607 506 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 CLCN5P51795 746 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 AMPD2Q01433 879 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 GOLGA8FQ08AF8 430 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 GOLGA8DPQ0D2H9 430 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 PHLDB3Q6NSJ2 640 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 TPRG1Q6ZUI0 275 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 C11orf57Q6ZUT1 292 aaPredicted RBP13.6□□□□□ -0.23
PHF1-210ENST00000488767 SIX6OS1Q8N1H7 587 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 ZMIZ2Q8NF64 920 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 USP13Q92995 863 aaPredicted RBP13.6□□□□□ -0.23
PHF1-210ENST00000488767 CDK5RAP1Q96SZ6 601 aaKnown RBP13.6□□□□□ -0.23
PHF1-210ENST00000488767 TBC1D17Q9HA65 648 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 LRRC4Q9HBW1 653 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 CHORDC1Q9UHD1 332 aaPredicted RBP13.6□□□□□ -0.23
PHF1-210ENST00000488767 ARHGAP26Q9UNA1 814 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 MYO10Q9HD67 2058 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 PTPRDP23468 1912 aa13.6□□□□□ -0.23
PHF1-210ENST00000488767 LRRC10BA6NIK2 292 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 BECN2A8MW95 431 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 M0QYV0 167 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 XPO1O14980 1071 aaKnown RBP13.59□□□□□ -0.23
PHF1-210ENST00000488767 NCAM2O15394 837 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 CAVIN2O95810 425 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 MBL2P11226 248 aaPredicted RBP13.59□□□□□ -0.23
PHF1-210ENST00000488767 SLC9A1P19634 815 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 PON1P27169 355 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 NUBP1P53384 320 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 TPM4P67936 248 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 MTF1Q14872 753 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 PDGFRLQ15198 375 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 CNGA2Q16280 664 aa13.59□□□□□ -0.23
PHF1-210ENST00000488767 ARHGAP44Q17R89 818 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms