RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 ZNF512BQ96KM6 892 aaPredicted RBP6.62□□□□□ -1.35
SIK3-212ENST00000488337 TM9SF2Q99805 663 aa6.62□□□□□ -1.35
SIK3-212ENST00000488337 GDF15Q99988 308 aa6.62□□□□□ -1.35
SIK3-212ENST00000488337 SPZ1Q9BXG8 430 aa6.62□□□□□ -1.35
SIK3-212ENST00000488337 DPEP3Q9H4B8 488 aa6.62□□□□□ -1.35
SIK3-212ENST00000488337 SP140LQ9H930 580 aa6.62□□□□□ -1.35
SIK3-212ENST00000488337 FAM217BQ9NTX9 383 aaPredicted RBP6.62□□□□□ -1.35
SIK3-212ENST00000488337 NDE1Q9NXR1 346 aa6.62□□□□□ -1.35
SIK3-212ENST00000488337 KCTD5Q9NXV2 234 aa6.62□□□□□ -1.35
SIK3-212ENST00000488337 RWDD2AQ9UIY3 292 aa6.62□□□□□ -1.35
SIK3-212ENST00000488337 ANAPC5Q9UJX4 755 aa6.62□□□□□ -1.35
SIK3-212ENST00000488337 PLAGL2Q9UPG8 496 aa6.62□□□□□ -1.35
SIK3-212ENST00000488337 PITPNM2Q9BZ72 1349 aa6.62□□□□□ -1.35
SIK3-212ENST00000488337 RGS16O15492 202 aaPredicted RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 PRDM1O75626 825 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 TOMM70O94826 608 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 CYP7A1P22680 504 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 CDK16Q00536 496 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 HP1BP3Q5SSJ5 553 aaPredicted RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 OGFRL1Q5TC84 451 aaPredicted RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 DUPD1Q68J44 220 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 BRINP3Q76B58 766 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 DHDDSQ86SQ9 333 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 MINDY2Q8NBR6 621 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 BBOF1Q8ND07 529 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 CFAP57Q96MR6 1250 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 NACC1Q96RE7 527 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 SLITRK6Q9H5Y7 841 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 CD209Q9NNX6 404 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 ZNF277Q9NRM2 450 aaPredicted RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 CEP72Q9P209 647 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 ADAMTS6Q9UKP5 1117 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 TNKSO95271 1327 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 CAPN14A8MX76 684 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 H3BNX3 289 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 PSMD11O00231 422 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 ZWINTO95229 277 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 GNL1P36915 607 aaPredicted RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 GPD2P43304 727 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 BMXP51813 675 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 KRT81Q14533 505 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 LRRC14Q15048 493 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 SMU1Q2TAY7 513 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 ARSHQ5FYA8 562 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 PIK3AP1Q6ZUJ8 805 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 LRRC6Q86X45 466 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 SNX32Q86XE0 403 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 RASSF5Q8WWW0 418 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 PSPC1Q8WXF1 523 aaKnown RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 HPS1Q92902 700 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 SH3KBP1Q96B97 665 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 TXNDC15Q96J42 360 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 TTPALQ9BTX7 342 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 NT5C3AQ9H0P0 336 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 VWA7Q9Y334 891 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 PCDHA3Q9Y5H8 950 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 RTL9Q8NET4 1388 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 ABCB11O95342 1321 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 SPDYE2BA6NHP3 402 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 PRKAB2O43741 272 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 NUAK1O60285 661 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 ADAM11O75078 769 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 GABBR2O75899 941 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 CDK14O94921 469 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 TNFAIP8O95379 198 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 PLEKP08567 350 aaPredicted RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 SPDYE6P0CI01 402 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 RRM1P23921 792 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 DRG2P55039 364 aaKnown RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 NCOA4Q13772 614 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 ALX1Q15699 326 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 SPDYE2Q495Y8 402 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 PLEKHG4Q58EX7 1191 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 TTBK2Q6IQ55 1244 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 KYAT3Q6YP21 454 aaKnown RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 FBXO11Q86XK2 927 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 CCDC28AQ8IWP9 274 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 VPS33AQ96AX1 596 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 TBC1D20Q96BZ9 403 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 SLC39A13Q96H72 371 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 FEM1CQ96JP0 617 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 USB1Q9BQ65 265 aaKnown RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 TARS2Q9BW92 718 aaKnown RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 ROPN1BQ9BZX4 212 aaPredicted RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 TRIT1Q9H3H1 467 aaKnown RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 ROPN1Q9HAT0 212 aaPredicted RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 CYP26B1Q9NR63 512 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 COL22A1Q8NFW1 1626 aaPredicted RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 PHRF1Q9P1Y6 1649 aaKnown RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 ADGRA3Q8IWK6 1321 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 RNF103O00237 685 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 USP1O94782 785 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 MTHFD1P11586 935 aaKnown RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 CYP3A5P20815 502 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 DNM2P50570 870 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 ARHGDIBP52566 201 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 TFDP1Q14186 410 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 SQLEQ14534 574 aa6.61□□□□□ -1.35
SIK3-212ENST00000488337 TRMT5Q32P41 509 aaKnown RBP6.61□□□□□ -1.35
SIK3-212ENST00000488337 LRIT3Q3SXY7 679 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms