RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 GPR17Q13304 367 aa18.38■□□□□ 0.53
CCDC78-214ENST00000485091 TAF5Q15542 800 aa18.38■□□□□ 0.53
CCDC78-214ENST00000485091 DDR2Q16832 855 aa18.38■□□□□ 0.53
CCDC78-214ENST00000485091 SDHAF4Q5VUM1 108 aa18.38■□□□□ 0.53
CCDC78-214ENST00000485091 CHRDL2Q6WN34 429 aa18.38■□□□□ 0.53
CCDC78-214ENST00000485091 SIX6OS1Q8N1H7 587 aa18.38■□□□□ 0.53
CCDC78-214ENST00000485091 EMC1Q8N766 993 aa18.38■□□□□ 0.53
CCDC78-214ENST00000485091 LRRC57Q8N9N7 239 aa18.38■□□□□ 0.53
CCDC78-214ENST00000485091 KCTD13Q8WZ19 329 aa18.38■□□□□ 0.53
CCDC78-214ENST00000485091 OXCT2Q9BYC2 517 aaPredicted RBP18.38■□□□□ 0.53
CCDC78-214ENST00000485091 MRPL17Q9NRX2 175 aaKnown RBP18.38■□□□□ 0.53
CCDC78-214ENST00000485091 NLRC5Q86WI3 1866 aa18.38■□□□□ 0.53
CCDC78-214ENST00000485091 SIGLEC16A6NMB1 481 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 HHLA1C9JL84 531 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 MYO1FO00160 1098 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 RFC1P35251 1148 aaPredicted RBP18.37■□□□□ 0.53
CCDC78-214ENST00000485091 RPL34P49207 117 aaKnown RBP18.37■□□□□ 0.53
CCDC78-214ENST00000485091 SLC6A3Q01959 620 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 CFAP221Q4G0U5 840 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 PPP1R15BQ5SWA1 713 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 SLC8B1Q6J4K2 584 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 PEX26Q7Z412 305 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 SYCE1Q8N0S2 351 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 STKLD1Q8NE28 680 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 FUBP3Q96I24 572 aaKnown RBP eCLIP18.37■□□□□ 0.53
CCDC78-214ENST00000485091 SEPT5Q99719 369 aaPredicted RBP18.37■□□□□ 0.53
CCDC78-214ENST00000485091 ALG6Q9Y672 507 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 TMEM191CA6NGB0 347 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 URI1O94763 535 aaPredicted RBP18.37■□□□□ 0.53
CCDC78-214ENST00000485091 VNN2O95498 520 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 PBX2P40425 430 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 GSCP56915 257 aaPredicted RBP18.37■□□□□ 0.53
CCDC78-214ENST00000485091 ADCY1Q08828 1119 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 DUSP4Q13115 394 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 MGAT5BQ3V5L5 792 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 OLFML1Q6UWY5 402 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 TMC7Q7Z402 723 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 PSMB7Q99436 277 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 GDF15Q99988 308 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 ULBP1Q9BZM6 244 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 ZBP1Q9H171 429 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 CRISPLD1Q9H336 500 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 CYLDQ9NQC7 956 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 COLQQ9Y215 455 aaPredicted RBP18.37■□□□□ 0.53
CCDC78-214ENST00000485091 USTQ9Y2C2 406 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 JRKLQ9Y4A0 524 aa18.37■□□□□ 0.53
CCDC78-214ENST00000485091 USP17L7P0C7H9 530 aa18.36■□□□□ 0.53
CCDC78-214ENST00000485091 OGDHQ02218 1023 aa18.36■□□□□ 0.53
CCDC78-214ENST00000485091 TAP1Q03518 808 aa18.36■□□□□ 0.53
CCDC78-214ENST00000485091 DAB2IPQ5VWQ8 1189 aa18.36■□□□□ 0.53
CCDC78-214ENST00000485091 SLFN11Q7Z7L1 901 aa18.36■□□□□ 0.53
CCDC78-214ENST00000485091 SPPL2BQ8TCT7 592 aa18.36■□□□□ 0.53
CCDC78-214ENST00000485091 GPR152Q8TDT2 470 aa18.36■□□□□ 0.53
CCDC78-214ENST00000485091 CALR3Q96L12 384 aaKnown RBP18.36■□□□□ 0.53
CCDC78-214ENST00000485091 AMFRQ9UKV5 643 aa18.36■□□□□ 0.53
CCDC78-214ENST00000485091 CXCL14O95715 111 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 CTSAP10619 480 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 COMTP21964 271 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 MRPS5P82675 430 aaKnown RBP18.35■□□□□ 0.53
CCDC78-214ENST00000485091 RAB41Q5JT25 222 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 MEI1Q5TIA1 1274 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 C11orf63Q6NUN7 778 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 VSTM1Q6UX27 236 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 NT5DC3Q86UY8 548 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 ZDHHC17Q8IUH5 632 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 SCAMP5Q8TAC9 235 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 POF1BQ8WVV4 589 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 UBXN6Q9BZV1 441 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 CERS4Q9HA82 394 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 ENTPD7Q9NQZ7 604 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 YBX2Q9Y2T7 364 aaKnown RBP18.35■□□□□ 0.53
CCDC78-214ENST00000485091 RWDD3Q9Y3V2 267 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 PLXNA4Q9HCM2 1894 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 SPOPO43791 374 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 PSMA2P25787 234 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 SSR1P43307 286 aaKnown RBP18.35■□□□□ 0.53
CCDC78-214ENST00000485091 ERVFC1P60507 584 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 SMARCB1Q12824 385 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 KHSRPQ92945 711 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCDC78-214ENST00000485091 FAM149B1Q96BN6 582 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 TCF25Q9BQ70 676 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 ABCB6Q9NP58 842 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 STK39Q9UEW8 545 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 IP6K2Q9UHH9 426 aa18.35■□□□□ 0.53
CCDC78-214ENST00000485091 PTPRDP23468 1912 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.34■□□□□ 0.53
CCDC78-214ENST00000485091 TRIM66O15016 1216 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 TEX28O15482 410 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 PROSCO94903 275 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 HAPLN1P10915 354 aaPredicted RBP18.34■□□□□ 0.53
CCDC78-214ENST00000485091 DNAJB1P25685 340 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 FLT3P36888 993 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 SLC5A3P53794 718 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 ZNF252P-AS1Q0IIN9 211 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 PLPP4Q5VZY2 271 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 SPPL3Q8TCT6 385 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 C2orf15Q8WU43 125 aaKnown RBP18.34■□□□□ 0.53
CCDC78-214ENST00000485091 RXFP2Q8WXD0 754 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 C8orf48Q96LL4 319 aa18.34■□□□□ 0.53
CCDC78-214ENST00000485091 TLR10Q9BXR5 811 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms