RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 CMTM8Q8IZV2 173 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 FUKQ8N0W3 1084 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 MAB21L3Q8N8X9 362 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 C12orf29Q8N999 325 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 IRF7Q92985 503 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 JAKMIP2Q96AA8 810 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 PBXIP1Q96AQ6 731 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 MED15Q96RN5 788 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 TWNKQ96RR1 684 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 ARID3AQ99856 593 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 TRMT61BQ9BVS5 477 aaKnown RBP8.28□□□□□ -1.08
MACF1-220ENST00000485063 INTS2Q9H0H0 1204 aaKnown RBP8.28□□□□□ -1.08
MACF1-220ENST00000485063 NDST4Q9H3R1 872 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 BRD9Q9H8M2 597 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 KIF9Q9HAQ2 790 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 TRPV4Q9HBA0 871 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 IL21Q9HBE4 155 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 TRPC7Q9HCX4 862 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 THG1LQ9NWX6 298 aaKnown RBP8.28□□□□□ -1.08
MACF1-220ENST00000485063 OBP2AQ9NY56 170 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 TMEM63CQ9P1W3 806 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 WNT16Q9UBV4 365 aa8.28□□□□□ -1.08
MACF1-220ENST00000485063 ANAPC1Q9H1A4 1944 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 PATJQ8NI35 1801 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 FAM86C2PA6NEL3 165 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 SMTNL1A8MU46 457 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 HEPACAM2A8MVW5 462 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 ZNF263O14978 683 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 NARSO43776 548 aaKnown RBP8.27□□□□□ -1.09
MACF1-220ENST00000485063 CKMP06732 381 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 PAEPP09466 180 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 USP17L7P0C7H9 530 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 NPR3P17342 541 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 PFKLP17858 780 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 WEE1P30291 646 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 SLC5A3P53794 718 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 TYRO3Q06418 890 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 TAF10Q12962 218 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 STILQ15468 1287 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 FKBP15Q5T1M5 1219 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 STXBP5Q5T5C0 1151 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 ARHGAP17Q68EM7 881 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 TXNDC8Q6A555 127 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 TANGO2Q6ICL3 276 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 TRIM65Q6PJ69 517 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 TMEM270Q6UE05 265 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 PAQR9Q6ZVX9 377 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 RRAGAQ7L523 313 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 BMP8AQ7Z5Y6 402 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 MON1AQ86VX9 555 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 IRF2BP1Q8IU81 584 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 MFSD6LQ8IWD5 586 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 CELF5Q8N6W0 485 aaKnown RBP8.27□□□□□ -1.09
MACF1-220ENST00000485063 SLC4A11Q8NBS3 891 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 ST13P5Q8NFI4 369 aaPredicted RBP8.27□□□□□ -1.09
MACF1-220ENST00000485063 LMO3Q8TAP4 145 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 CSGALNACT1Q8TDX6 532 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 WHAMMQ8TF30 809 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 OVCA2Q8WZ82 227 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 FBXO32Q969P5 355 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 SHDQ96IW2 340 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 ZSWIM3Q96MP5 696 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 KCNK16Q96T55 309 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 CRACR2AQ9BSW2 395 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 TTLL2Q9BWV7 592 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 SLC46A2Q9BY10 475 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 DUSP16Q9BY84 665 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 CSNK1G1Q9HCP0 422 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 PNPLA8Q9NP80 782 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 UBE2TQ9NPD8 197 aaPredicted RBP8.27□□□□□ -1.09
MACF1-220ENST00000485063 SLC2A4RGQ9NR83 387 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 TLR8Q9NR97 1041 aaKnown RBP8.27□□□□□ -1.09
MACF1-220ENST00000485063 SAMSN1Q9NSI8 373 aaKnown RBP8.27□□□□□ -1.09
MACF1-220ENST00000485063 APEX2Q9UBZ4 518 aa8.27□□□□□ -1.09
MACF1-220ENST00000485063 HELZP42694 1942 aaKnown RBP8.27□□□□□ -1.09
MACF1-220ENST00000485063 BECN2A8MW95 431 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 MED7O43513 233 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 KRT5P13647 590 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 HDCP19113 662 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 SLC9A1P19634 815 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 ACO1P21399 889 aaKnown RBP8.26□□□□□ -1.09
MACF1-220ENST00000485063 GDI1P31150 447 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 USP8P40818 1118 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 VIPR2P41587 438 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 CACNA2D1P54289 1103 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 BCAT1P54687 386 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 TPM4P67936 248 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 GPC5P78333 572 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 PLCB2Q00722 1185 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 GRM2Q14416 872 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 ARHGAP44Q17R89 818 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 ANO6Q4KMQ2 910 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 ARHGAP29Q52LW3 1261 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 SMYD5Q6GMV2 418 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 PHLDB3Q6NSJ2 640 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 CC2D1AQ6P1N0 951 aaPredicted RBP8.26□□□□□ -1.09
MACF1-220ENST00000485063 VITQ6UXI7 678 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 CLEC20AQ6ZU45 233 aa8.26□□□□□ -1.09
MACF1-220ENST00000485063 C11orf57Q6ZUT1 292 aaPredicted RBP8.26□□□□□ -1.09
MACF1-220ENST00000485063 ARHGEF19Q8IW93 802 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms