RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 LRPAP1P30533 357 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 MSX2P35548 267 aaPredicted RBP5.05□□□□□ -1.6
XPA-203ENST00000485042 GCLCP48506 637 aaPredicted RBP5.05□□□□□ -1.6
XPA-203ENST00000485042 TOB1P50616 345 aaPredicted RBP5.05□□□□□ -1.6
XPA-203ENST00000485042 ALDH18A1P54886 795 aaKnown RBP5.05□□□□□ -1.6
XPA-203ENST00000485042 NSUN2Q08J23 767 aaKnown RBP eCLIP5.05□□□□□ -1.6
XPA-203ENST00000485042 G3BP1Q13283 466 aaKnown RBP eCLIP5.05□□□□□ -1.6
XPA-203ENST00000485042 SIM2Q14190 667 aaPredicted RBP5.05□□□□□ -1.6
XPA-203ENST00000485042 SURF1Q15526 300 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 ZNF750Q32MQ0 723 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 METTL24Q5JXM2 366 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 FBXO47Q5MNV8 452 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 SPATA31D4Q6ZUB0 917 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 C2CD5Q86YS7 1000 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 FTSJ3Q8IY81 847 aaKnown RBP5.05□□□□□ -1.6
XPA-203ENST00000485042 D2HGDHQ8N465 521 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 BPIFB1Q8TDL5 484 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 PPP2R3CQ969Q6 453 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 GRAMD1AQ96CP6 724 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 GNRHR2Q96P88 292 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 MPHOSPH9Q99550 1183 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 PYM1Q9BRP8 204 aaKnown RBP5.05□□□□□ -1.6
XPA-203ENST00000485042 SLC46A2Q9BY10 475 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 SLC25A32Q9H2D1 315 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 SMOC2Q9H3U7 446 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 EPS8L2Q9H6S3 715 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 SEPSECSQ9HD40 501 aaKnown RBP5.05□□□□□ -1.6
XPA-203ENST00000485042 RIC8AQ9NPQ8 531 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 IFT80Q9P2H3 777 aaPredicted RBP5.05□□□□□ -1.6
XPA-203ENST00000485042 SRP68Q9UHB9 627 aaKnown RBP5.05□□□□□ -1.6
XPA-203ENST00000485042 CLIP1P30622 1438 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 ALKQ9UM73 1620 aa5.05□□□□□ -1.6
XPA-203ENST00000485042 NEURL4Q96JN8 1562 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 hCG_1984214I3L0E3 225 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 EYA2O00167 538 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 TOR1BO14657 336 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 DNPH1O43598 174 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 CCNT2O60583 730 aaKnown RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 SRGAP2O75044 1071 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 TSPAN15O95858 294 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 POLBP06746 335 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 ITGALP20701 1170 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 MST1P26927 711 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 HNRNPMP52272 730 aaKnown RBP eCLIP5.04□□□□□ -1.6
XPA-203ENST00000485042 ZNF134P52741 427 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 LOXL3P58215 753 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 AP2B1P63010 937 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 FOXL1Q12952 345 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 ZIK1Q3SY52 487 aaPredicted RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 INTS11Q5TA45 600 aaKnown RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 ATPAF1Q5TC12 328 aaPredicted RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 SLFN13Q68D06 897 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 FOXR2Q6PJQ5 311 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 TMEM108Q6UXF1 575 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 RSRC2Q7L4I2 434 aaKnown RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 PCGF5Q86SE9 256 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 SYT12Q8IV01 421 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 RASGRP3Q8IV61 690 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 GSPT2Q8IYD1 628 aaKnown RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 SPARTQ8N0X7 666 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 SPPL3Q8TCT6 385 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 AFG1LQ8WV93 481 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 RILPL2Q969X0 211 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 RBM15Q96T37 977 aaKnown RBP eCLIP5.04□□□□□ -1.6
XPA-203ENST00000485042 NELL2Q99435 816 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 SEC62Q99442 399 aaKnown RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 RTKNQ9BST9 563 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 TAF1DQ9H5J8 278 aaPredicted RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 HELLSQ9NRZ9 838 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 DNMT3BQ9UBC3 853 aaKnown RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 SWAP70Q9UH65 585 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 CA14Q9ULX7 337 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 MRPS17Q9Y2R5 130 aaKnown RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 DTNAQ9Y4J8 743 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 TCOF1Q13428 1488 aaKnown RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 ADGBQ8N7X0 1667 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 NPATQ14207 1427 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 FMN1Q68DA7 1419 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 CNTLNQ9NXG0 1405 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 INO80Q9ULG1 1556 aaPredicted RBP5.04□□□□□ -1.6
XPA-203ENST00000485042 AATKQ6ZMQ8 1374 aa5.04□□□□□ -1.6
XPA-203ENST00000485042 SETD1AO15047 1707 aaKnown RBP5.03□□□□□ -1.6
XPA-203ENST00000485042 ATP7AQ04656 1500 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 XIRP1Q702N8 1843 aaKnown RBP5.03□□□□□ -1.6
XPA-203ENST00000485042 LAMTOR5O43504 91 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 ERN1O75460 977 aaKnown RBP5.03□□□□□ -1.6
XPA-203ENST00000485042 SOAT2O75908 522 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 RHOBTB3O94955 611 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 VIPP01282 170 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 CKMT1AP12532 417 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 XBP1P17861 261 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 BDNFP23560 247 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 CST5P28325 142 aaPredicted RBP5.03□□□□□ -1.6
XPA-203ENST00000485042 MAN1A1P33908 653 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 ADD2P35612 726 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 RAP1GAPP47736 663 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 PAPOLAP51003 745 aaKnown RBP5.03□□□□□ -1.6
XPA-203ENST00000485042 DGKEP52429 567 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 BCAT1P54687 386 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms