RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 USTQ9Y2C2 406 aa10.62□□□□□ -0.71
HDAC6-226ENST00000483656 PTPRDP23468 1912 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 OR6C75A6NL08 312 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 ZBBXA8MT70 800 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 DPYSL4O14531 572 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 ADAM12O43184 909 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 CEP104O60308 925 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 GRAP2O75791 330 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 GJB5O95377 273 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 PYGMP11217 842 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 CYP2F1P24903 491 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 PSMA2P25787 234 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 ALDH7A1P49419 539 aaKnown RBP10.61□□□□□ -0.71
HDAC6-226ENST00000483656 ZNF143P52747 638 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-226ENST00000483656 SNX16P57768 344 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 RNASE9P60153 205 aaKnown RBP10.61□□□□□ -0.71
HDAC6-226ENST00000483656 ZNF211Q13398 564 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-226ENST00000483656 PIGHQ14442 188 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-226ENST00000483656 CCDC14Q49A88 953 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 SH3PXD2AQ5TCZ1 1133 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 TXNRD3NBQ6F5E7 133 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 ZNF280DQ6N043 979 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 PRSS55Q6UWB4 352 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-226ENST00000483656 SLC26A9Q7LBE3 791 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 BHLHA9Q7RTU4 235 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 DCP1BQ8IZD4 617 aaKnown RBP10.61□□□□□ -0.71
HDAC6-226ENST00000483656 MNS1Q8NEH6 495 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-226ENST00000483656 HERVK_113Q902F9 699 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 TSC1Q92574 1164 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 ZNF558Q96NG5 402 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 TTPALQ9BTX7 342 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 ADAM33Q9BZ11 813 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 ULBP1Q9BZM6 244 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 CARD9Q9H257 536 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 LCMT1Q9UIC8 334 aa10.61□□□□□ -0.71
HDAC6-226ENST00000483656 ZMYND8Q9ULU4 1186 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-226ENST00000483656 UQCRHLA0A096LP55 91 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 CCDC66A2RUB6 948 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 CTAGE15A4D2H0 777 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 H7C4K7 107 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 TNFRSF10BO14763 440 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 LRCH4O75427 683 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 UQCRHP07919 91 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 CTAGE8P0CG41 777 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 LAG3P18627 525 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 TFE3P19532 575 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 GPD1P21695 349 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 TKTL1P51854 596 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 SLC8A3P57103 927 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 DAOAP59103 153 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 MRPS5P82675 430 aaKnown RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 CKAP4Q07065 602 aaKnown RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 C15orf59Q2T9L4 293 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 USP41Q3LFD5 358 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 CFAP221Q4G0U5 840 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 ATP13A4Q4VNC1 1196 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 SPOUT1Q5T280 376 aaKnown RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 PSRC1Q6PGN9 363 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 C4orf50Q6ZRC1 276 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 HFE2Q6ZVN8 426 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 ANKS3Q6ZW76 656 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 ARCQ7LC44 396 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 CTAGE6Q86UF2 777 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 SPATA2LQ8IUW3 424 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 CTAGE4Q8IX94 777 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 ZDHHC14Q8IZN3 488 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 UBL4BQ8N7F7 174 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 NOA1Q8NC60 698 aaKnown RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 ACTRT1Q8TDG2 376 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 PIK3R5Q8WYR1 880 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 YME1L1Q96TA2 773 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 CNPY3Q9BT09 278 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 C11orf84Q9BUA3 381 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 HERC2P3Q9BVR0 1158 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 CRISPLD1Q9H336 500 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 LRRC4Q9HBW1 653 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 DMAP1Q9NPF5 467 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 MTRRQ9UBK8 725 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 RNF14Q9UBS8 474 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 TTC7AQ9ULT0 858 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 BACE2Q9Y5Z0 518 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 USP3Q9Y6I4 520 aa10.6□□□□□ -0.71
HDAC6-226ENST00000483656 V9GYY5 206 aaPredicted RBP10.6□□□□□ -0.71
HDAC6-226ENST00000483656 MTMR11A4FU01 709 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 EFCAB8A8MWE9 144 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 PSTPIP1O43586 416 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 SOD2P04179 222 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 FYNP06241 537 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 PDGFRAP16234 1089 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 IL1R2P27930 398 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 MAGEA11P43364 429 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 GPR15P49685 360 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 RWDD2BP57060 319 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 SLC25A11Q02978 314 aaKnown RBP10.59□□□□□ -0.71
HDAC6-226ENST00000483656 ITIH3Q06033 890 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 C2orf54Q08AI8 447 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 GPR17Q13304 367 aa10.59□□□□□ -0.71
HDAC6-226ENST00000483656 NFE2Q16621 373 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms