RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 CMTM8Q8IZV2 173 aa15□□□□□ -0.01
PDE6D-204ENST00000477748 SLC35C1Q96A29 364 aa15□□□□□ -0.01
PDE6D-204ENST00000477748 SMARCD1Q96GM5 515 aa15□□□□□ -0.01
PDE6D-204ENST00000477748 IPO9Q96P70 1041 aaKnown RBP15□□□□□ -0.01
PDE6D-204ENST00000477748 GBP4Q96PP9 640 aa15□□□□□ -0.01
PDE6D-204ENST00000477748 NT5C1AQ9BXI3 368 aa15□□□□□ -0.01
PDE6D-204ENST00000477748 DNAI2Q9GZS0 605 aa15□□□□□ -0.01
PDE6D-204ENST00000477748 SMG9Q9H0W8 520 aaKnown RBP15□□□□□ -0.01
PDE6D-204ENST00000477748 TRPC7Q9HCX4 862 aa15□□□□□ -0.01
PDE6D-204ENST00000477748 NDRG2Q9UN36 371 aaKnown RBP15□□□□□ -0.01
PDE6D-204ENST00000477748 CACNA1BQ00975 2339 aa15□□□□□ -0.01
PDE6D-204ENST00000477748 COL4A2P08572 1712 aa15□□□□□ -0.01
PDE6D-204ENST00000477748 DMXL1Q9Y485 3027 aa15□□□□□ -0.01
PDE6D-204ENST00000477748 FANCMQ8IYD8 2048 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 TADA3O75528 432 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 AP1G2O75843 785 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 CCDC130P13994 396 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 ID4P47928 161 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 USP46P62068 366 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 IFRD2Q12894 506 aaPredicted RBP14.99□□□□□ -0.01
PDE6D-204ENST00000477748 MTAPQ13126 283 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 PAQR9Q6ZVX9 377 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 FUKQ8N0W3 1084 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 CELF5Q8N6W0 485 aaKnown RBP14.99□□□□□ -0.01
PDE6D-204ENST00000477748 SLC2A14Q8TDB8 520 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 BPIFB1Q8TDL5 484 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 ATRIPQ8WXE1 791 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 TATDN2Q93075 761 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 FAXDC2Q96IV6 333 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 TWNKQ96RR1 684 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 KCNK16Q96T55 309 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 SRRTQ9BXP5 876 aaKnown RBP14.99□□□□□ -0.01
PDE6D-204ENST00000477748 NUP62CLQ9H1M0 184 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 KRT82Q9NSB4 513 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 LMBRD1Q9NUN5 540 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 FAM49BQ9NUQ9 324 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 TMEM30AQ9NV96 361 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 ZSCAN32Q9NX65 697 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 TRPM5Q9NZQ8 1165 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 COQ4Q9Y3A0 265 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 PATJQ8NI35 1801 aa14.99□□□□□ -0.01
PDE6D-204ENST00000477748 TRAV19A0A0A6YYK7 116 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 CILPO75339 1184 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 FGFR1OPO95684 399 aaKnown RBP14.98□□□□□ -0.01
PDE6D-204ENST00000477748 GNA14O95837 355 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 FMO5P49326 533 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 KPNA1P52294 538 aaPredicted RBP14.98□□□□□ -0.01
PDE6D-204ENST00000477748 LRRC32Q14392 662 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 RALGPS2Q86X27 583 aaPredicted RBP14.98□□□□□ -0.01
PDE6D-204ENST00000477748 NUP93Q8N1F7 819 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 TTC39CQ8N584 583 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 C12orf29Q8N999 325 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 ZBTB44Q8NCP5 570 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 WHAMMQ8TF30 809 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 RUBCNQ92622 972 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 NELL1Q92832 810 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 USP13Q92995 863 aaPredicted RBP14.98□□□□□ -0.01
PDE6D-204ENST00000477748 LRRC3BQ96PB8 259 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 TTLL2Q9BWV7 592 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 DMAP1Q9NPF5 467 aaPredicted RBP14.98□□□□□ -0.01
PDE6D-204ENST00000477748 TDP1Q9NUW8 608 aa14.98□□□□□ -0.01
PDE6D-204ENST00000477748 THG1LQ9NWX6 298 aaKnown RBP14.98□□□□□ -0.01
PDE6D-204ENST00000477748 RTN3O95197 1032 aaPredicted RBP14.97□□□□□ -0.01
PDE6D-204ENST00000477748 ABL1P00519 1130 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 CKMP06732 381 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 USP17L7P0C7H9 530 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 YWHAQP27348 245 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 ADORA2BP29275 332 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 PPP3CCP48454 512 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 CCR3P51677 355 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 NRLP54845 237 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 TAF10Q12962 218 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 ZNF394Q53GI3 561 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 ARL14EPQ8N8R7 260 aaPredicted RBP14.97□□□□□ -0.01
PDE6D-204ENST00000477748 MLKLQ8NB16 471 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 CYFIP2Q96F07 1278 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 ZFYVE19Q96K21 471 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 SLITRK1Q96PX8 696 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 HNRNPABQ99729 332 aaKnown RBP14.97□□□□□ -0.01
PDE6D-204ENST00000477748 ARID3AQ99856 593 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 HINFPQ9BQA5 517 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 KIF9Q9HAQ2 790 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 CISHQ9NSE2 258 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 RWDD2AQ9UIY3 292 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 CCL26Q9Y258 94 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 DNAH14Q0VDD8 3507 aa14.97□□□□□ -0.01
PDE6D-204ENST00000477748 C2orf78A6NCI8 922 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 SPECC1L-ADORA2AF8WAN1 911 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 GOLGA6L22H0YM25 854 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 LILRB5O75023 590 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 FAM200BP0CF97 657 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 CCDC192P0DO97 292 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 CHRNB1P11230 501 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 HDCP19113 662 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 CTHP32929 405 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 PDE6CP51160 858 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 MAP3K7CLP57077 242 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 CETN1Q12798 172 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 LRMPQ12912 555 aa14.96□□□□□ -0.01
PDE6D-204ENST00000477748 ZNF268Q14587 947 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms