RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 FNDC1Q4ZHG4 1894 aaPredicted RBP11.31□□□□□ -0.6
SP140-208ENST00000473711 LTBP2Q14767 1821 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 OR6C75A6NL08 312 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 GOLGA8CPA6NN73 597 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 ZNF185O15231 689 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 PAPSS1O43252 624 aaPredicted RBP11.3□□□□□ -0.6
SP140-208ENST00000473711 SPOPO43791 374 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 GRAP2O75791 330 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 PROSCO94903 275 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 GJB5O95377 273 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 PRLRP16471 622 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 LAG3P18627 525 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 RFC1P35251 1148 aaPredicted RBP11.3□□□□□ -0.6
SP140-208ENST00000473711 RPL34P49207 117 aaKnown RBP11.3□□□□□ -0.6
SP140-208ENST00000473711 GSCP56915 257 aaPredicted RBP11.3□□□□□ -0.6
SP140-208ENST00000473711 SLC6A3Q01959 620 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 OGDHQ02218 1023 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 TUBB2AQ13885 445 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 USP41Q3LFD5 358 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 ZNF280DQ6N043 979 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 PRSS55Q6UWB4 352 aaPredicted RBP11.3□□□□□ -0.6
SP140-208ENST00000473711 C4orf50Q6ZRC1 276 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 SLC39A11Q8N1S5 342 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 FIBCD1Q8N539 461 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 EMC1Q8N766 993 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 ZMIZ2Q8NF64 920 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 COG1Q8WTW3 980 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 KCTD13Q8WZ19 329 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 NDRG1Q92597 394 aaKnown RBP11.3□□□□□ -0.6
SP140-208ENST00000473711 SMARCD1Q96GM5 515 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 CAPZA3Q96KX2 299 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 TUBB2BQ9BVA1 445 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 VN1R3Q9BXE9 311 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 L2HGDHQ9H9P8 463 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 LRRC4Q9HBW1 653 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 CYLDQ9NQC7 956 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 TMEM30AQ9NV96 361 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 SPG21Q9NZD8 308 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 IP6K2Q9UHH9 426 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 USTQ9Y2C2 406 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 ALPK3Q96L96 1907 aa11.3□□□□□ -0.6
SP140-208ENST00000473711 MYH10P35580 1976 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 C2CD2LO14523 706 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 KCNK3O14649 394 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 DDX3YO15523 660 aaKnown RBP11.29□□□□□ -0.6
SP140-208ENST00000473711 EFEMP2O95967 443 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 TCP1P17987 556 aaKnown RBP11.29□□□□□ -0.6
SP140-208ENST00000473711 CYP2F1P24903 491 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 PSMA2P25787 234 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 GRIK1P39086 918 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 SLC1A1P43005 524 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 SSR1P43307 286 aaKnown RBP11.29□□□□□ -0.6
SP140-208ENST00000473711 NDUFV1P49821 464 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 HTRA4P83105 476 aaPredicted RBP11.29□□□□□ -0.6
SP140-208ENST00000473711 ADIGQ0VDE8 80 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 TAF5Q15542 800 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 KIAA1841Q6NSI8 718 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 RSPO2Q6UXX9 243 aaPredicted RBP11.29□□□□□ -0.6
SP140-208ENST00000473711 ANKS3Q6ZW76 656 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 HERC6Q8IVU3 1022 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 SCN4BQ8IWT1 228 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 CLEC4CQ8WTT0 213 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 RIN2Q8WYP3 895 aaPredicted RBP11.29□□□□□ -0.6
SP140-208ENST00000473711 TMEM169Q96HH4 297 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 HES6Q96HZ4 224 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 PIWIL1Q96J94 861 aaKnown RBP11.29□□□□□ -0.6
SP140-208ENST00000473711 PGLYRP2Q96PD5 576 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 CARD6Q9BX69 1037 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 UBXN6Q9BZV1 441 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 AAASQ9NRG9 546 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 ABI2Q9NYB9 513 aaPredicted RBP11.29□□□□□ -0.6
SP140-208ENST00000473711 INSL6Q9Y581 213 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 COL4A6Q14031 1691 aa11.29□□□□□ -0.6
SP140-208ENST00000473711 HHLA1C9JL84 531 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 TBC1D4O60343 1298 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 SOD2P04179 222 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 CPB1P15086 417 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 ATP2A2P16615 1042 aaKnown RBP11.28□□□□□ -0.6
SP140-208ENST00000473711 COL9A1P20849 921 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 CTNNA2P26232 953 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 TKTL1P51854 596 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 ZNF252P-AS1Q0IIN9 211 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 PIGHQ14442 188 aaPredicted RBP11.28□□□□□ -0.6
SP140-208ENST00000473711 NFE2Q16621 373 aaPredicted RBP11.28□□□□□ -0.6
SP140-208ENST00000473711 WHAMMP3Q1A5X7 153 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 DAB2IPQ5VWQ8 1189 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 CC2D1AQ6P1N0 951 aaPredicted RBP11.28□□□□□ -0.6
SP140-208ENST00000473711 OLFML1Q6UWY5 402 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 GPRIN1Q7Z2K8 1008 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 ZDHHC17Q8IUH5 632 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 RNF168Q8IYW5 571 aaPredicted RBP11.28□□□□□ -0.6
SP140-208ENST00000473711 SIX6OS1Q8N1H7 587 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 UBL4BQ8N7F7 174 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.28□□□□□ -0.6
SP140-208ENST00000473711 PHOSPHO2Q8TCD6 241 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 RXFP2Q8WXD0 754 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 KRT35Q92764 455 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 CD101Q93033 1021 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 MS4A14Q96JA4 679 aa11.28□□□□□ -0.6
SP140-208ENST00000473711 PBKQ96KB5 322 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms