RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 CUEDC2Q9H467 287 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 CCSER2Q9H7U1 834 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 THG1LQ9NWX6 298 aaKnown RBP8.61□□□□□ -1.03
USP48-207ENST00000471752 OSER1Q9NX31 292 aa8.61□□□□□ -1.03
USP48-207ENST00000471752 KMT2BQ9UMN6 2715 aaPredicted RBP8.61□□□□□ -1.03
USP48-207ENST00000471752 TCHHQ07283 1943 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 TRAV19A0A0A6YYK7 116 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 PAPSS2O95340 614 aaPredicted RBP8.6□□□□□ -1.03
USP48-207ENST00000471752 CYP17A1P05093 508 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 USP17L7P0C7H9 530 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 TRIM49P0CI25 452 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 TRIM49CP0CI26 452 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 PYGBP11216 843 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 PDIA4P13667 645 aaKnown RBP8.6□□□□□ -1.03
USP48-207ENST00000471752 CMA1P23946 247 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 CLDN10P78369 228 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 PPP3CAQ08209 521 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 TRPC3Q13507 836 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 NCOA4Q13772 614 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 LRRC32Q14392 662 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 SURF1Q15526 300 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 C2orf27AQ580R0 203 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 TCEAL6Q6IPX3 200 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 WDR5BQ86VZ2 330 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 C12orf56Q8IXR9 622 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 FUKQ8N0W3 1084 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 CCDC33Q8N5R6 958 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 RPLP0P6Q8NHW5 317 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 WHAMMQ8TF30 809 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 TCEAL3Q969E4 200 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 FUBP3Q96I24 572 aaKnown RBP eCLIP8.6□□□□□ -1.03
USP48-207ENST00000471752 C8orf48Q96LL4 319 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 FNBP1Q96RU3 617 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 TTLL2Q9BWV7 592 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 LRRC27Q9C0I9 530 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 ARRDC1-AS1Q9H2J1 176 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 KIAA1586Q9HCI6 787 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 SEMA4GQ9NTN9 838 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 FAM13BQ9NYF5 915 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 CFAP97Q9P2B7 532 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 NUDT5Q9UKK9 219 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 GTF3C3Q9Y5Q9 886 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 CPQQ9Y646 472 aa8.6□□□□□ -1.03
USP48-207ENST00000471752 MAP1BP46821 2468 aaKnown RBP8.59□□□□□ -1.03
USP48-207ENST00000471752 ABCA7Q8IZY2 2146 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 DSPP15924 2871 aaKnown RBP8.59□□□□□ -1.03
USP48-207ENST00000471752 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.59□□□□□ -1.03
USP48-207ENST00000471752 KIAA0391O15091 583 aaKnown RBP8.59□□□□□ -1.03
USP48-207ENST00000471752 MDM4O15151 490 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 COCHO43405 550 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 GREM1O60565 184 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 PHACTR2O75167 634 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 AKAP3O75969 853 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 OAS1P00973 400 aaKnown RBP8.59□□□□□ -1.03
USP48-207ENST00000471752 HLA-DRAP01903 254 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 NR3C1P04150 777 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 RPN1P04843 607 aaKnown RBP8.59□□□□□ -1.03
USP48-207ENST00000471752 RETP07949 1114 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 DDX6P26196 483 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP48-207ENST00000471752 ASPAP45381 313 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 GCLMP48507 274 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 VASPP50552 380 aaPredicted RBP8.59□□□□□ -1.03
USP48-207ENST00000471752 NDST1P52848 882 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 NRLP54845 237 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 TNNC1P63316 161 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 SLC7A9P82251 487 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 GRSF1Q12849 480 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP48-207ENST00000471752 DPYDQ12882 1025 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 PSMD2Q13200 908 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 BIRC3Q13489 604 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 PUM1Q14671 1186 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP48-207ENST00000471752 PDGFRLQ15198 375 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 DHCR24Q15392 516 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 LAIR1Q6GTX8 287 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 CC2D1AQ6P1N0 951 aaPredicted RBP8.59□□□□□ -1.03
USP48-207ENST00000471752 VSTM1Q6UX27 236 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 TMEM92Q6UXU6 159 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 C4orf50Q6ZRC1 276 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 STXBP4Q6ZWJ1 553 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 SV2AQ7L0J3 742 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 FAM35AQ86V20 835 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 NAT16Q8N8M0 369 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 B3GALNT2Q8NCR0 500 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 SLC2A14Q8TDB8 520 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 TAS1R2Q8TE23 839 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 SEMA4DQ92854 862 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 CD101Q93033 1021 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 JAKMIP2Q96AA8 810 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 FAM126AQ9BYI3 521 aaPredicted RBP8.59□□□□□ -1.03
USP48-207ENST00000471752 NMUR1Q9HB89 426 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 FAM49BQ9NUQ9 324 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 IL37Q9NZH6 218 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 TRPM5Q9NZQ8 1165 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 GMIPQ9P107 970 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 ARHGAP26Q9UNA1 814 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 SPEGQ15772 3267 aa8.59□□□□□ -1.03
USP48-207ENST00000471752 NUP210Q8TEM1 1887 aaPredicted RBP8.58□□□□□ -1.04
USP48-207ENST00000471752 FAM237AA0A1B0GTK4 181 aa8.58□□□□□ -1.04
USP48-207ENST00000471752 HHLA1C9JL84 531 aa8.58□□□□□ -1.04
USP48-207ENST00000471752 PDXKO00764 312 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms