RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 LIMS2Q7Z4I7 341 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 VPS52Q8N1B4 723 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 TOP6BLQ8N6T0 577 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 APPL2Q8NEU8 664 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 OR6B3Q8NGW1 331 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 KRT12Q99456 494 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 TMEM175Q9BSA9 504 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 SNX25Q9H3E2 840 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 SLITRK6Q9H5Y7 841 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 ENTPD7Q9NQZ7 604 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 STIM2Q9P246 746 aa18.41■□□□□ 0.54
HSPG2-208ENST00000471322 SIGLEC16A6NMB1 481 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 PSTPIP1O43586 416 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 SETSIPP0DME0 302 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 PAX3P23760 479 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 RPL9P32969 192 aaKnown RBP18.4■□□□□ 0.54
HSPG2-208ENST00000471322 GNL1P36915 607 aaPredicted RBP18.4■□□□□ 0.54
HSPG2-208ENST00000471322 GPD2P43304 727 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 GABRB2P47870 512 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 CLCNKBP51801 687 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 LILRA4P59901 499 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 ORC1Q13415 861 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 PPP1R15BQ5SWA1 713 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 TAS1R1Q7RTX1 841 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 TMC7Q7Z402 723 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 ADGRD2Q7Z7M1 963 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 RHOT1Q8IXI2 618 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 IFT20Q8IY31 132 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 CRYBG2Q8N1P7 616 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 CCDC26Q8TAB7 109 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 IPO4Q8TEX9 1081 aaKnown RBP18.4■□□□□ 0.54
HSPG2-208ENST00000471322 B3GALT6Q96L58 329 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 MUC3AQ02505 3323 aa18.4■□□□□ 0.54
HSPG2-208ENST00000471322 BRWD1Q9NSI6 2320 aa18.39■□□□□ 0.54
HSPG2-208ENST00000471322 HIDE1A8MVS5 230 aa18.39■□□□□ 0.53
HSPG2-208ENST00000471322 A8MXQ7 604 aa18.39■□□□□ 0.53
HSPG2-208ENST00000471322 PER2O15055 1255 aa18.39■□□□□ 0.53
HSPG2-208ENST00000471322 ZRANB2O95218 330 aaKnown RBP eCLIP18.39■□□□□ 0.53
HSPG2-208ENST00000471322 PSMC1P62191 440 aaKnown RBP18.39■□□□□ 0.53
HSPG2-208ENST00000471322 PTPN20Q4JDL3 420 aa18.39■□□□□ 0.53
HSPG2-208ENST00000471322 ARHGAP17Q68EM7 881 aa18.39■□□□□ 0.53
HSPG2-208ENST00000471322 CCNI2Q6ZMN8 369 aaPredicted RBP18.39■□□□□ 0.53
HSPG2-208ENST00000471322 MAATS1Q7Z4T9 603 aa18.39■□□□□ 0.53
HSPG2-208ENST00000471322 IGFLR1Q9H665 355 aa18.39■□□□□ 0.53
HSPG2-208ENST00000471322 LMCD1Q9NZU5 365 aa18.39■□□□□ 0.53
HSPG2-208ENST00000471322 HESX1Q9UBX0 185 aa18.39■□□□□ 0.53
HSPG2-208ENST00000471322 C2CD2LO14523 706 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 TADA2AO75478 443 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 KRT3P12035 628 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 TNFRSF8P28908 595 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 UBE3AQ05086 875 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 PDCLQ13371 301 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 ZNF211Q13398 564 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-208ENST00000471322 LRRC38Q5VT99 294 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 LLGL2Q6P1M3 1020 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 EP400NLQ6ZTU2 488 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 ACOT1Q86TX2 421 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 NIPA2Q8N8Q9 360 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 FNIP1Q8TF40 1166 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 STK32AQ8WU08 396 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 MAIP1Q8WWC4 291 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 TNIP3Q96KP6 325 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 AP1M1Q9BXS5 423 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 GPR62Q9BZJ7 368 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 TRIM7Q9C029 511 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 LMAN2LQ9H0V9 348 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 NSUN3Q9H649 340 aaKnown RBP18.38■□□□□ 0.53
HSPG2-208ENST00000471322 ZNF446Q9NWS9 450 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 TSPAN16Q9UKR8 245 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 ATG2AQ2TAZ0 1938 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 SPTLC1O15269 473 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 B3GAT3O94766 335 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 SLC34A2O95436 690 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 PYGMP11217 842 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 WARSP23381 471 aaKnown RBP18.38■□□□□ 0.53
HSPG2-208ENST00000471322 MARCKSL1P49006 195 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 BEND6Q5SZJ8 279 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-208ENST00000471322 DDX53Q86TM3 631 aaKnown RBP18.38■□□□□ 0.53
HSPG2-208ENST00000471322 KLHL7Q8IXQ5 586 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 C3orf58Q8NDZ4 430 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 CPXM1Q96SM3 734 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 COLEC11Q9BWP8 271 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 CYTH4Q9UIA0 394 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 ADAM28Q9UKQ2 775 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 LZTS1Q9Y250 596 aa18.38■□□□□ 0.53
HSPG2-208ENST00000471322 I3L4J1 428 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 SART1O43290 800 aaKnown RBP18.37■□□□□ 0.53
HSPG2-208ENST00000471322 CETN2P41208 172 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 NRIP1P48552 1158 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 RPL7AP62424 266 aaKnown RBP18.37■□□□□ 0.53
HSPG2-208ENST00000471322 UPP1Q16831 310 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 GOLGA7BQ2TAP0 167 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 TIGD5Q53EQ6 642 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 CYP4A22Q5TCH4 519 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 XYLT1Q86Y38 959 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 SLC13A5Q86YT5 568 aaPredicted RBP18.37■□□□□ 0.53
HSPG2-208ENST00000471322 ADGRF2Q8IZF7 708 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 HDAC7Q8WUI4 952 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 KBTBD7Q8WVZ9 684 aa18.37■□□□□ 0.53
HSPG2-208ENST00000471322 MCRS1Q96EZ8 462 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms