RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CISHQ9NSE2 258 aa12.24□□□□□ -0.45
CDHR3-205ENST00000468143 EHD2Q9NZN4 543 aa12.24□□□□□ -0.45
CDHR3-205ENST00000468143 KIAA1468Q9P260 1216 aa12.24□□□□□ -0.45
CDHR3-205ENST00000468143 WNT6Q9Y6F9 365 aa12.24□□□□□ -0.45
CDHR3-205ENST00000468143 BICDL2A1A5D9 508 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 TNFRSF10BO14763 440 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 SCAMP3O14828 347 aaKnown RBP12.23□□□□□ -0.45
CDHR3-205ENST00000468143 RTN3O95197 1032 aaPredicted RBP12.23□□□□□ -0.45
CDHR3-205ENST00000468143 FAM200BP0CF97 657 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 TRIM21P19474 475 aaKnown RBP12.23□□□□□ -0.45
CDHR3-205ENST00000468143 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
CDHR3-205ENST00000468143 PAK1Q13153 545 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 RUNX3Q13761 415 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 ZNF268Q14587 947 aaPredicted RBP12.23□□□□□ -0.45
CDHR3-205ENST00000468143 MTF1Q14872 753 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 PON2Q15165 354 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 ITPRIPL2Q3MIP1 535 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 PPP1R26Q5T8A7 1209 aaPredicted RBP12.23□□□□□ -0.45
CDHR3-205ENST00000468143 GPRIN1Q7Z2K8 1008 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 CREBRFQ8IUR6 639 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 MAML2Q8IZL2 1156 aaPredicted RBP12.23□□□□□ -0.45
CDHR3-205ENST00000468143 ZNF687Q8N1G0 1237 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 CLDN23Q96B33 292 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 SLITRK1Q96PX8 696 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 HNRNPABQ99729 332 aaKnown RBP12.23□□□□□ -0.45
CDHR3-205ENST00000468143 LINC00597Q9H2U6 94 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 C8orf33Q9H7E9 229 aaPredicted RBP12.23□□□□□ -0.45
CDHR3-205ENST00000468143 KIF9Q9HAQ2 790 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 CSNK1G1Q9HCP0 422 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 RBM12Q9NTZ6 932 aaKnown RBP12.23□□□□□ -0.45
CDHR3-205ENST00000468143 DUS2Q9NX74 493 aaKnown RBP12.23□□□□□ -0.45
CDHR3-205ENST00000468143 SMPD4Q9NXE4 827 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 COQ4Q9Y3A0 265 aa12.23□□□□□ -0.45
CDHR3-205ENST00000468143 TRIOO75962 3097 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 LEFTY2O00292 366 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 LAMTOR5O43504 91 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 SP9P0CG40 484 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 CHRNB1P11230 501 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 CTHP32929 405 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 PPP3CCP48454 512 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 FMO5P49326 533 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 PGFP49763 221 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 RAD23BP54727 409 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 CSTF1Q05048 431 aaKnown RBP12.22□□□□□ -0.45
CDHR3-205ENST00000468143 MTAPQ13126 283 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 ZNF77Q15935 545 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 TSSK4Q6SA08 328 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 CLEC20AQ6ZU45 233 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 RALGPS2Q86X27 583 aaPredicted RBP12.22□□□□□ -0.45
CDHR3-205ENST00000468143 TRIML1Q8N9V2 468 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 SLC4A11Q8NBS3 891 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 TMEM176AQ96HP8 235 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 GMIPQ9P107 970 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 ARHGAP26Q9UNA1 814 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 CPQQ9Y646 472 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 R4GN57 208 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 ZDBF2Q9HCK1 2354 aa12.22□□□□□ -0.45
CDHR3-205ENST00000468143 HHLA1C9JL84 531 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 COCHO43405 550 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 OAS1P00973 400 aaKnown RBP12.21□□□□□ -0.45
CDHR3-205ENST00000468143 MBL2P11226 248 aaPredicted RBP12.21□□□□□ -0.45
CDHR3-205ENST00000468143 ACO1P21399 889 aaKnown RBP12.21□□□□□ -0.45
CDHR3-205ENST00000468143 RPS9P46781 194 aaKnown RBP12.21□□□□□ -0.45
CDHR3-205ENST00000468143 IFNAR2P48551 515 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 MLLT6P55198 1093 aaPredicted RBP12.21□□□□□ -0.45
CDHR3-205ENST00000468143 USP4Q13107 963 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 CUL2Q13617 745 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 PDGFRLQ15198 375 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 NAIF1Q69YI7 327 aaPredicted RBP12.21□□□□□ -0.45
CDHR3-205ENST00000468143 PDZD8Q8NEN9 1154 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 OSCP1Q8WVF1 389 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 MED15Q96RN5 788 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 CLSTN2Q9H4D0 955 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 CCSER2Q9H7U1 834 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 FBRSL1Q9HCM7 1045 aaKnown RBP12.21□□□□□ -0.45
CDHR3-205ENST00000468143 IL37Q9NZH6 218 aa12.21□□□□□ -0.45
CDHR3-205ENST00000468143 TICRRQ7Z2Z1 1910 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 OLFM2O95897 454 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 NBL1P41271 181 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 MAGEA9P43362 315 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 PDE6CP51160 858 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 GALK1P51570 392 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 SLC7A9P82251 487 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 KCNH2Q12809 1159 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 GAS6Q14393 721 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 HECTD3Q5T447 861 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 Q6ZS52 159 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 RRAGAQ7L523 313 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 OVCA2Q8WZ82 227 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 KAT5Q92993 513 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 CHFRQ96EP1 664 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 MSANTD3Q96H12 275 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 FAXDC2Q96IV6 333 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 DUSP16Q9BY84 665 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 DNAI2Q9GZS0 605 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 ECT2Q9H8V3 914 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 LMBRD1Q9NUN5 540 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 COMMD8Q9NX08 183 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 CFAP97Q9P2B7 532 aa12.2□□□□□ -0.46
CDHR3-205ENST00000468143 RWDD2AQ9UIY3 292 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms