RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 AP4M1O00189 453 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 BTN3A1O00481 513 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 AP1G1O43747 822 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 EXOC3O60645 756 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 ALDH1L1O75891 902 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 FGAP02671 866 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 MYCLP12524 364 aaPredicted RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 APEHP13798 732 aaKnown RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 GKP32189 559 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 CCT4P50991 539 aaKnown RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 ALDH5A1P51649 535 aaPredicted RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 BCAT1P54687 386 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 LINC00205P59089 165 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 TIAL1Q01085 375 aaKnown RBP eCLIP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 KRT17Q04695 432 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 RABEP1Q15276 862 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 TTF1Q15361 905 aaPredicted RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 SEC23BQ15437 767 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 TRIP6Q15654 476 aaKnown RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 FAM187BQ17R55 369 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 PTCHD3Q3KNS1 767 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 TBC1D25Q3MII6 688 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 PLA1AQ53H76 456 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 DCAF12L1Q5VU92 463 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 ZNF783Q6ZMS7 281 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 ZNF517Q6ZMY9 492 aaPredicted RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 EPM2AIP1Q7L775 607 aaPredicted RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 CNGA4Q8IV77 575 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 ZBTB34Q8NCN2 500 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 OR56A3Q8NH54 315 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 IL31RAQ8NI17 732 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 WDYHV1Q96HA8 205 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 C17orf80Q9BSJ5 609 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 EFHD1Q9BUP0 239 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 CDH19Q9H159 772 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 CNNM1Q9NRU3 951 aa3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 TRMT13Q9NUP7 481 aaKnown RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 TRNAU1APQ9NX07 287 aaKnown RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 DNMT3BQ9UBC3 853 aaKnown RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 NOP58Q9Y2X3 529 aaKnown RBP3.74□□□□□ -1.81
GTF3C3-209ENST00000466862 BTBD19C9JJ37 291 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 UBE2Q2LH0YL09 131 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 M0R3H8 397 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 ADAM10O14672 748 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 TBX3O15119 743 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 AKAP10O43572 662 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 SPRY2O43597 315 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 PMPCBO75439 489 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 TUSC2O75896 110 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 KITP10721 976 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 KRTAP10-6P60371 365 aaPredicted RBP3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 CFHR1Q03591 330 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 LMAN2Q12907 356 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 LARS2Q15031 903 aaKnown RBP3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 MLC1Q15049 377 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 C10orf25Q5T742 122 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 MIS18BP1Q6P0N0 1132 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 MICU3Q86XE3 530 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 OR6B3Q8NGW1 331 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 SLC35G2Q8TBE7 412 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 RUNDC1Q96C34 613 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 HMCESQ96FZ2 354 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 VCPIP1Q96JH7 1222 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 PUS7Q96PZ0 661 aaKnown RBP3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 FAM118BQ9BPY3 351 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 B3GNT5Q9BYG0 378 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 C22orf23Q9BZE7 217 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 MS4A7Q9GZW8 240 aaPredicted RBP3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 XPNPEP3Q9NQH7 507 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 STK32BQ9NY57 414 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 RGS17Q9UGC6 210 aaPredicted RBP3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 AMFRQ9UKV5 643 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 CDY1Q9Y6F8 540 aa3.73□□□□□ -1.81
GTF3C3-209ENST00000466862 A0A1W2PPL8 197 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 E2F8A0AVK6 867 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 MBD3L4A6NDZ8 208 aaPredicted RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 MBD3L3A6NE82 208 aaPredicted RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 SOCS2O14508 198 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 PHGDHO43175 533 aaKnown RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 CNOT3O75175 753 aaKnown RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 A1BGP04217 495 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 HOXB6P17509 224 aaKnown RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 ATF7P17544 494 aaPredicted RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 IL1R2P27930 398 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 DIO1P49895 249 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 SATB1Q01826 763 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 SLC13A2Q13183 592 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 ZNF268Q14587 947 aaPredicted RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 TRIM71Q2Q1W2 868 aaKnown RBP3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 ANO6Q4KMQ2 910 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 AWAT1Q58HT5 328 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 ZDHHC24Q6UX98 284 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 SERPINA13PQ6UXR4 307 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 PTCHD4Q6ZW05 846 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 DAAM2Q86T65 1068 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 TPH2Q8IWU9 490 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 C16orf52Q8NHV5 167 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 DNAJB14Q8TBM8 379 aa3.72□□□□□ -1.81
GTF3C3-209ENST00000466862 JPH3Q8WXH2 748 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms