RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 AK2P54819 239 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 AARS2Q5JTZ9 985 aaKnown RBP7.16□□□□□ -1.26
PTCD3-205ENST00000464541 PLAG1Q6DJT9 500 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 BEND5Q7L4P6 421 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 ZNF804AQ7Z570 1209 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 RNF152Q8N8N0 203 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 DNAJB14Q8TBM8 379 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 TBC1D5Q92609 795 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 TRIM36Q9NQ86 728 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 C11orf21Q9P2W6 132 aa7.16□□□□□ -1.26
PTCD3-205ENST00000464541 M0R3H8 397 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 PROP1O75360 226 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 FESP07332 822 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 EBLN1P0CF75 366 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 STT3AP46977 705 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 TPTEP56180 551 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 TIAL1Q01085 375 aaKnown RBP eCLIP7.15□□□□□ -1.26
PTCD3-205ENST00000464541 PTCHD3Q3KNS1 767 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 CATSPERGQ6ZRH7 1159 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 PARS2Q7L3T8 475 aaKnown RBP7.15□□□□□ -1.26
PTCD3-205ENST00000464541 KRT28Q7Z3Y7 464 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 SARAFQ96BY9 339 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 TBCBQ99426 244 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 EIF2AQ9BY44 585 aaKnown RBP7.15□□□□□ -1.26
PTCD3-205ENST00000464541 KRTAP4-5Q9BYR2 181 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 ZNF700Q9H0M5 742 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 TBC1D30Q9Y2I9 924 aa7.15□□□□□ -1.26
PTCD3-205ENST00000464541 A0A1W2PPC4 97 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 RASA4BC9J798 803 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 RASA4O43374 803 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 JUPP14923 745 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 DRD4P21917 467 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 ITPKBP27987 946 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 TBC1D25Q3MII6 688 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 ZNF362Q5T0B9 420 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-205ENST00000464541 USP17L6PQ6QN14 398 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 NOL8Q76FK4 1167 aaKnown RBP7.14□□□□□ -1.27
PTCD3-205ENST00000464541 CCDC146Q8IYE0 955 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 LRRC71Q8N4P6 559 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 VGLL2Q8N8G2 317 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 FAM98AQ8NCA5 519 aaKnown RBP7.14□□□□□ -1.27
PTCD3-205ENST00000464541 TMEM171Q8WVE6 324 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 BRI3BPQ8WY22 251 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 R3HDM4Q96D70 268 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 ZDHHC12Q96GR4 267 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 BBC3Q96PG8 261 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-205ENST00000464541 C17orf80Q9BSJ5 609 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 VN1R3Q9BXE9 311 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 INO80BQ9C086 356 aaPredicted RBP7.14□□□□□ -1.27
PTCD3-205ENST00000464541 DUSP22Q9NRW4 184 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 DLL3Q9NYJ7 618 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 MYO1AQ9UBC5 1043 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 USP22Q9UPT9 525 aa7.14□□□□□ -1.27
PTCD3-205ENST00000464541 PSMD9O00233 223 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 QSOX1O00391 747 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 FAM163BP0C2L3 166 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 GPD1P21695 349 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 UQCRC1P31930 480 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 MTHFSP49914 203 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 PDE1AP54750 535 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 AKNAD1Q5T1N1 836 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 TSTD2Q5T7W7 516 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 SLC9A4Q6AI14 798 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 KCTD20Q7Z5Y7 419 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 CAND1Q86VP6 1230 aaKnown RBP7.13□□□□□ -1.27
PTCD3-205ENST00000464541 ADGRG3Q86Y34 549 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 CCDC33Q8N5R6 958 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 XAGE5Q8WWM1 108 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 KLK15Q9H2R5 256 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 HEYLQ9NQ87 328 aaPredicted RBP7.13□□□□□ -1.27
PTCD3-205ENST00000464541 PHTF1Q9UMS5 762 aa7.13□□□□□ -1.27
PTCD3-205ENST00000464541 DRG1Q9Y295 367 aaKnown RBP7.13□□□□□ -1.27
PTCD3-205ENST00000464541 H0YIZ8 118 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 NPSP0C0P6 89 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 MYL4P12829 197 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 FGFR2P21802 821 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 CYP2C18P33260 490 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 ALDH5A1P51649 535 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-205ENST00000464541 EEFSECP57772 596 aaKnown RBP7.12□□□□□ -1.27
PTCD3-205ENST00000464541 TIRAPP58753 221 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 LONRF1Q17RB8 773 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 MAP9Q49MG5 647 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 IL31Q6EBC2 164 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 Q6ZWC4 215 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 SVIPQ8NHG7 77 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 TNIP3Q96KP6 325 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 MYD88Q99836 296 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 DPCDQ9BVM2 203 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-205ENST00000464541 FSD1LQ9BXM9 530 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 CPNE5Q9HCH3 593 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 ARPP21Q9UBL0 812 aaPredicted RBP7.12□□□□□ -1.27
PTCD3-205ENST00000464541 DNAJB11Q9UBS4 358 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 ST3GAL5Q9UNP4 418 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 COX11Q9Y6N1 276 aa7.12□□□□□ -1.27
PTCD3-205ENST00000464541 APOL1O14791 398 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 ERBB2P04626 1255 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 PGDP52209 483 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 HDAC1Q13547 482 aaPredicted RBP7.11□□□□□ -1.27
PTCD3-205ENST00000464541 LY6KQ17RY6 165 aa7.11□□□□□ -1.27
PTCD3-205ENST00000464541 CEP85Q6P2H3 762 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms