RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 PHIPQ8WWQ0 1821 aa14.28□□□□□ -0.12
POLR1B-209ENST00000448770 ADCY3O60266 1144 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 DNAJC6O75061 913 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 MAP3K6O95382 1288 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 MT-ND3P03897 115 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 RBP3P10745 1247 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 MIPP30301 263 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 CNTN2Q02246 1040 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 KCNJ11Q14654 390 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 CMPK2Q5EBM0 449 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 FAXCQ5TGI0 409 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 PCGF5Q86SE9 256 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 ZC3H18Q86VM9 953 aaKnown RBP14.27□□□□□ -0.12
POLR1B-209ENST00000448770 CHSY1Q86X52 802 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 TMEM192Q8IY95 271 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 SH3TC2Q8TF17 1288 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 NSL1Q96IY1 281 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 ANKRD27Q96NW4 1050 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 PHACTR1Q9C0D0 580 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 TTLL3Q9Y4R7 772 aa14.27□□□□□ -0.12
POLR1B-209ENST00000448770 FCHO1O14526 889 aa14.27□□□□□ -0.13
POLR1B-209ENST00000448770 CCDC22O60826 627 aa14.27□□□□□ -0.13
POLR1B-209ENST00000448770 TOP3BO95985 862 aaKnown RBP14.27□□□□□ -0.13
POLR1B-209ENST00000448770 OSTNP61366 133 aa14.27□□□□□ -0.13
POLR1B-209ENST00000448770 PSMC1P62191 440 aaKnown RBP14.27□□□□□ -0.13
POLR1B-209ENST00000448770 TFAMQ00059 246 aaKnown RBP14.27□□□□□ -0.13
POLR1B-209ENST00000448770 TARBP2Q15633 366 aaKnown RBP14.27□□□□□ -0.13
POLR1B-209ENST00000448770 SEPT7Q16181 437 aaKnown RBP14.27□□□□□ -0.13
POLR1B-209ENST00000448770 MDH1BQ5I0G3 518 aa14.27□□□□□ -0.13
POLR1B-209ENST00000448770 SNX30Q5VWJ9 437 aa14.27□□□□□ -0.13
POLR1B-209ENST00000448770 NXF1Q9UBU9 619 aaKnown RBP14.27□□□□□ -0.13
POLR1B-209ENST00000448770 STRIP2Q9ULQ0 834 aa14.27□□□□□ -0.13
POLR1B-209ENST00000448770 AFG3L2Q9Y4W6 797 aa14.27□□□□□ -0.13
POLR1B-209ENST00000448770 KAT6AQ92794 2004 aa14.27□□□□□ -0.13
POLR1B-209ENST00000448770 PIK3R2O00459 728 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 CYB561D2O14569 222 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 NVLO15381 856 aaKnown RBP14.26□□□□□ -0.13
POLR1B-209ENST00000448770 CD19P15391 556 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 SERPINB4P48594 390 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 HMGCS2P54868 508 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 MRPS5P82675 430 aaKnown RBP14.26□□□□□ -0.13
POLR1B-209ENST00000448770 NBPF12Q5TAG4 269 aaPredicted RBP14.26□□□□□ -0.13
POLR1B-209ENST00000448770 PRAMEF18Q5VWM3 479 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 PPP1R2P3Q6NXS1 205 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 PDIK1LQ8N165 341 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.26□□□□□ -0.13
POLR1B-209ENST00000448770 SPATA18Q8TC71 538 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 SLC7A3Q8WY07 619 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 ZBTB10Q96DT7 871 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 CALN1Q9BXU9 219 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 ZNF518BQ9C0D4 1074 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 C20orf27Q9GZN8 174 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 EFR3BQ9Y2G0 817 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 APOC4-APOC2K7ER74 178 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 CAPN9O14815 690 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 GYG2O15488 501 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 APOC2P02655 101 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
POLR1B-209ENST00000448770 GJB1P08034 283 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 RARBP10826 455 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 BACE1P56817 501 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 TAP1Q03518 808 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 ZNF699Q32M78 642 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 AGBL3Q8NEM8 1001 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 CMASQ8NFW8 434 aaPredicted RBP14.26□□□□□ -0.13
POLR1B-209ENST00000448770 PRPF31Q8WWY3 499 aaKnown RBP14.26□□□□□ -0.13
POLR1B-209ENST00000448770 CFAP36Q96G28 342 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 OXNAD1Q96HP4 312 aaPredicted RBP14.26□□□□□ -0.13
POLR1B-209ENST00000448770 CAMKK2Q96RR4 588 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 CYTH2Q99418 400 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 TMEM134Q9H6X4 195 aa14.26□□□□□ -0.13
POLR1B-209ENST00000448770 CPSF3Q9UKF6 684 aaKnown RBP14.26□□□□□ -0.13
POLR1B-209ENST00000448770 RPL26L1Q9UNX3 145 aaKnown RBP14.26□□□□□ -0.13
POLR1B-209ENST00000448770 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.26□□□□□ -0.13
POLR1B-209ENST00000448770 IGKV6D-21A0A0A0MT36 114 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 CCDC195A0A1B0GUA6 201 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 PSMG1O95456 288 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 YWHAGP61981 247 aaKnown RBP eCLIP14.25□□□□□ -0.13
POLR1B-209ENST00000448770 YWHAZP63104 245 aaKnown RBP14.25□□□□□ -0.13
POLR1B-209ENST00000448770 ZNF200P98182 395 aaPredicted RBP14.25□□□□□ -0.13
POLR1B-209ENST00000448770 BMPR2Q13873 1038 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 MUM1Q2TAK8 710 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 TEX9Q8N6V9 391 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 KCTD6Q8NC69 237 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 SCG3Q8WXD2 468 aaKnown RBP14.25□□□□□ -0.13
POLR1B-209ENST00000448770 ALKBH8Q96BT7 664 aaKnown RBP14.25□□□□□ -0.13
POLR1B-209ENST00000448770 CLPTM1LQ96KA5 538 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 SRPK1Q96SB4 655 aaKnown RBP14.25□□□□□ -0.13
POLR1B-209ENST00000448770 TCHPQ9BT92 498 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 NIFKQ9BYG3 293 aaKnown RBP14.25□□□□□ -0.13
POLR1B-209ENST00000448770 KRT82Q9NSB4 513 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 ADAMTS5Q9UNA0 930 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 ANK1P16157 1881 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 TRIM49D1C9J1S8 452 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 B4GALT5O43286 388 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 TRUB2O95900 331 aaKnown RBP14.25□□□□□ -0.13
POLR1B-209ENST00000448770 KRT7P08729 469 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 KCNA3P22001 575 aa14.25□□□□□ -0.13
POLR1B-209ENST00000448770 SP100P23497 879 aaPredicted RBP14.25□□□□□ -0.13
POLR1B-209ENST00000448770 RFC5P40937 340 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms