RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ARID2Q68CP9 1835 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 LPXNO60711 386 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 CDH5P33151 784 aaPredicted RBP14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 PTPN11Q06124 597 aaPredicted RBP14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 PTK7Q13308 1070 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 MAP1SQ66K74 1059 aaPredicted RBP14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 TRIM68Q6AZZ1 485 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 OR6B2Q6IFH4 312 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 PCGF5Q86SE9 256 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 CHST13Q8NET6 341 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 MANSC1Q9H8J5 431 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 KANSL3Q9P2N6 904 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 NR2E3Q9Y5X4 410 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 IKBKGQ9Y6K9 419 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 DCTN3O75935 186 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 MXD4Q14582 209 aaPredicted RBP14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 ZC3H12AQ5D1E8 599 aaKnown RBP14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 ANKRD20A2Q5SQ80 823 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 ANKRD20A1Q5TYW2 823 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 ANKRD20A3Q5VUR7 823 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 AGGF1Q8N302 714 aaeCLIP14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 ZNF276Q8N554 614 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 FAF2Q96CS3 445 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 GPR20Q99678 358 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 MAGEB5Q9BZ81 275 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 SPATC1LQ9H0A9 340 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 PDGFCQ9NRA1 345 aa14.16□□□□□ -0.14
HERPUD1-204ENST00000439977 TRUB2O95900 331 aaKnown RBP14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 PDGFRAP16234 1089 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 BGNP21810 368 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 PTPN7P35236 360 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 FYB2Q5VWT5 728 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 PPM1NQ8N819 430 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 BANPQ8N9N5 519 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 MZB1Q8WU39 189 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 MECRQ9BV79 373 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 LRMDAQ9H2I8 198 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 RNPEPQ9H4A4 650 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 ZNF395Q9H8N7 513 aaPredicted RBP14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 NGRNQ9NPE2 291 aaKnown RBP14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 HEY2Q9UBP5 337 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 E5RJQ4 531 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 ACKR2O00590 384 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 MED7O43513 233 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 ZWINTO95229 277 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 SESN3P58005 492 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 CCDC15Q0P6D6 951 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 CDCA2Q69YH5 1023 aaPredicted RBP14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 CLNKQ7Z7G1 428 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 RXFP2Q8WXD0 754 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 TMEM176AQ96HP8 235 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 RAB3IPQ96QF0 476 aaPredicted RBP14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 SLC13A1Q9BZW2 595 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 PTPRHQ9HD43 1115 aa14.15□□□□□ -0.14
HERPUD1-204ENST00000439977 APOC4-APOC2K7ER74 178 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 KCNN4O15554 427 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 UGT1A9O60656 530 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 APOC2P02655 101 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 INHBAP08476 426 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 STAG3L1P0CL83 205 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 SERPINB3P29508 390 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 ROR1Q01973 937 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 KLHL38Q2WGJ6 581 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 PPP6R3Q5H9R7 873 aaPredicted RBP14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 RFWD3Q6PCD5 774 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 TSHZ1Q6ZSZ6 1077 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 CDHR3Q6ZTQ4 885 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 RFX8Q6ZV50 586 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 TTC7BQ86TV6 843 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 TTC13Q8NBP0 860 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 NETO2Q8NC67 525 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 CMASQ8NFW8 434 aaPredicted RBP14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 PPP1R13LQ8WUF5 828 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 NUDCD1Q96RS6 583 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 LPIN3Q9BQK8 851 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 UGT1A7Q9HAW7 530 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 UGT1A10Q9HAW8 530 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 UGT1A8Q9HAW9 530 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 A0A1B0GUA9 196 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 CXorf49A8MYA2 514 aaPredicted RBP14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 B4GALT4O60513 344 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 APRTP07741 180 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 SKIV2L2P42285 1042 aaKnown RBP14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 GPD2P43304 727 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 ZBTB16Q05516 673 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 BMPR2Q13873 1038 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 RGS9BPQ6ZS82 235 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 CYTH2Q99418 400 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 LHX5Q9H2C1 402 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 CYLDQ9NQC7 956 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 ARMCX1Q9P291 453 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 GINS2Q9Y248 185 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 A0A087WZ62 844 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 CCDC195A0A1B0GUA6 201 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 USP2O75604 605 aaPredicted RBP14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 VTNP04004 478 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 TROVE2P10155 538 aaKnown RBP eCLIP14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 RBL1P28749 1068 aa14.14□□□□□ -0.15
HERPUD1-204ENST00000439977 ZNF200P98182 395 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms