RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TNFAIP8L3Q5GJ75 292 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 FAM102AQ5T9C2 384 aaPredicted RBP13.45□□□□□ -0.26
DDX56-204ENST00000431640 MICALCLQ6ZW33 695 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 BBS12Q6ZW61 710 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 SERINC5Q86VE9 423 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 NLRP14Q86W24 1093 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 SLC35B2Q8TB61 432 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 UBA3Q8TBC4 463 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 TMEM40Q8WWA1 233 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 GLT1D1Q96MS3 346 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 TTC25Q96NG3 672 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 TRPV6Q9H1D0 765 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 ZWILCHQ9H900 591 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 RSAD1Q9HA92 442 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 STARD7Q9NQZ5 370 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 KLHL11Q9NVR0 708 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 PCDH10Q9P2E7 1040 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 HESX1Q9UBX0 185 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 GGA2Q9UJY4 613 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 GINS2Q9Y248 185 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 SNX9Q9Y5X1 595 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 RALGAPA2Q2PPJ7 1873 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 ALPK3Q96L96 1907 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 FAM107AO95990 144 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 CYP3A5P20815 502 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 CHKAP35790 457 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 MMP13P45452 471 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 CCT5P48643 541 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 CDK7P50613 346 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 ARSEP51690 589 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 CRYBB1P53674 252 aaPredicted RBP13.45□□□□□ -0.26
DDX56-204ENST00000431640 STAT4Q14765 748 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 OASLQ15646 514 aaKnown RBP13.45□□□□□ -0.26
DDX56-204ENST00000431640 ARHGAP17Q68EM7 881 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 TXNRD3NBQ6F5E7 133 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 OR6B2Q6IFH4 312 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 FOXR1Q6PIV2 292 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 DPH6Q7L8W6 267 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 MAP7D3Q8IWC1 876 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 ARFGAP1Q8N6T3 406 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 CCT8L2Q96SF2 557 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 OSMRQ99650 979 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 MAK16Q9BXY0 300 aaKnown RBP13.45□□□□□ -0.26
DDX56-204ENST00000431640 PCDH9Q9HC56 1237 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 USP18Q9UMW8 372 aa13.45□□□□□ -0.26
DDX56-204ENST00000431640 TANC1Q9C0D5 1861 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 E7EVH7 732 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 TRAPPC3O43617 180 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 CST8O60676 142 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 ABHD2P08910 425 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 FAM163BP0C2L3 166 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 PDGFRAP16234 1089 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 MIPP30301 263 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 VPS41P49754 854 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 MGAT3Q09327 533 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 AUHQ13825 339 aaKnown RBP13.44□□□□□ -0.26
DDX56-204ENST00000431640 TFDP2Q14188 446 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 KYNUQ16719 465 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 BOLA3Q53S33 107 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 C9orf57Q5W0N0 161 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 SRLQ86TD4 932 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 TMEM110Q86TL2 294 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 FAM126BQ8IXS8 530 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 EMC1Q8N766 993 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 CFAP57Q96MR6 1250 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 ZNF560Q96MR9 790 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 ZMAT2Q96NC0 199 aaKnown RBP13.44□□□□□ -0.26
DDX56-204ENST00000431640 SLC4A5Q9BY07 1137 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
DDX56-204ENST00000431640 CYLDQ9NQC7 956 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 TJP2Q9UDY2 1190 aa13.44□□□□□ -0.26
DDX56-204ENST00000431640 C2CD4BA6NLJ0 364 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 SGK1O00141 431 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 ARVCFO00192 962 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 PIRO00625 290 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 DPYSL4O14531 572 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 ENDOD1O94919 500 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 ACSL3O95573 720 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 KCNE1P15382 129 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 IL1R2P27930 398 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 MAGEA4P43358 317 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 ATN1P54259 1190 aaPredicted RBP13.43□□□□□ -0.26
DDX56-204ENST00000431640 SLC6A3Q01959 620 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 GPS1Q13098 491 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 SNX17Q15036 470 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 PDK2Q15119 407 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 GOLGA7BQ2TAP0 167 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 PKDCCQ504Y2 493 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 XKR4Q5GH76 650 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 TRAF7Q6Q0C0 670 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 VSIG1Q86XK7 387 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 CRYBG2Q8N1P7 616 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 RIBC1Q8N443 379 aaPredicted RBP13.43□□□□□ -0.26
DDX56-204ENST00000431640 ZNF473Q8WTR7 871 aaKnown RBP13.43□□□□□ -0.26
DDX56-204ENST00000431640 RXFP2Q8WXD0 754 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 RBM15Q96T37 977 aaKnown RBP eCLIP13.43□□□□□ -0.264e-12■■■■□ 21.5
DDX56-204ENST00000431640 FAM118BQ9BPY3 351 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 MRPL45Q9BRJ2 306 aaKnown RBP13.43□□□□□ -0.26
DDX56-204ENST00000431640 PHACTR1Q9C0D0 580 aa13.43□□□□□ -0.26
DDX56-204ENST00000431640 SENP6Q9GZR1 1112 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms