RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 BCAS3Q9H6U6 928 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 XPNPEP1Q9NQW7 623 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 BAG5Q9UL15 447 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 TTLL13PA6NNM8 815 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 DBN1Q16643 649 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 KCTD10Q9H3F6 313 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 XAB2Q9HCS7 855 aaKnown RBP13.48□□□□□ -0.25
PTCH1-207ENST00000429896 CPSF2Q9P2I0 782 aaKnown RBP13.48□□□□□ -0.25
PTCH1-207ENST00000429896 OR6C75A6NL08 312 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 FGFR1P11362 822 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 SLCO1A2P46721 670 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 TMED2Q15363 201 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 CLEC16AQ2KHT3 1053 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 ASIC4Q96FT7 647 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 SEC31AO94979 1220 aaKnown RBP13.48□□□□□ -0.25
PTCH1-207ENST00000429896 THOC1Q96FV9 657 aaKnown RBP13.48□□□□□ -0.25
PTCH1-207ENST00000429896 ZIC5Q96T25 663 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 DNAJC7Q99615 494 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 A6NNZ2 444 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 GNGT2O14610 69 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 PAMP19021 973 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 CYP3A5P20815 502 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 NDUFV1P49821 464 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 DRP2Q13474 957 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 TUBB8Q3ZCM7 444 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 PABPC1LQ4VXU2 614 aaKnown RBP13.48□□□□□ -0.25
PTCH1-207ENST00000429896 CCDC38Q502W7 563 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 ZDHHC17Q8IUH5 632 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 UCMAQ8WVF2 138 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 FGD4Q96M96 766 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 RPRD1AQ96P16 312 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-207ENST00000429896 WRAP73Q9P2S5 460 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-207ENST00000429896 TUBGCP4Q9UGJ1 667 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 PI4K2BG5E9Z4 385 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 PLTPP55058 493 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 PPP2R2DQ66LE6 453 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 PCGF5Q86SE9 256 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 RBM23Q86U06 439 aaKnown RBP13.48□□□□□ -0.25
PTCH1-207ENST00000429896 UNC45BQ8IWX7 931 aa13.48□□□□□ -0.25
PTCH1-207ENST00000429896 PACSIN2Q9UNF0 486 aaPredicted RBP13.48□□□□□ -0.25
PTCH1-207ENST00000429896 ARL5CA6NH57 179 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 TGFB1I1O43294 461 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 GLUD1P00367 558 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 ADIGQ0VDE8 80 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 C18orf25Q96B23 403 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-207ENST00000429896 TTC25Q96NG3 672 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 TMEM161AQ9NX61 479 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 BRCC3P46736 316 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 ZNF606Q8WXB4 792 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 RASSF2P50749 326 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 NSUN2Q08J23 767 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTCH1-207ENST00000429896 PDCD7Q8N8D1 485 aaKnown RBP13.47□□□□□ -0.25
PTCH1-207ENST00000429896 OR5B17Q8NGF7 314 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 SLC20A1Q8WUM9 679 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 GBP5Q96PP8 586 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTCH1-207ENST00000429896 MAST2Q6P0Q8 1798 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 BOLA3Q53S33 107 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 THAP2Q9H0W7 228 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 ASAH2Q9NR71 780 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 KLHL14Q9P2G3 628 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 PLAGL2Q9UPG8 496 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 ATG7O95352 703 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
PTCH1-207ENST00000429896 PMLP29590 882 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 MTA1Q13330 715 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 TLE6Q9H808 572 aa13.47□□□□□ -0.25
PTCH1-207ENST00000429896 B4GALT4O60513 344 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 GZMAP12544 262 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 RAB30Q15771 203 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 ZC3H18Q86VM9 953 aaKnown RBP13.46□□□□□ -0.25
PTCH1-207ENST00000429896 BHMTQ93088 406 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 SNX27Q96L92 541 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.46□□□□□ -0.25
PTCH1-207ENST00000429896 OXCT2Q9BYC2 517 aaPredicted RBP13.46□□□□□ -0.25
PTCH1-207ENST00000429896 EPB41L5Q9HCM4 733 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 FAM50BQ9Y247 325 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 INHBAP08476 426 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 EIF3EP60228 445 aaKnown RBP13.46□□□□□ -0.25
PTCH1-207ENST00000429896 PDIK1LQ8N165 341 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 CARNMT1Q8N4J0 409 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 PABPC5Q96DU9 382 aaKnown RBP13.46□□□□□ -0.25
PTCH1-207ENST00000429896 FZD8Q9H461 694 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 CERS4Q9HA82 394 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 DNAJC25-GNG10A0A024R161 153 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 MTFR1Q15390 333 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 BBS9Q3SYG4 887 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 FAM228AQ86W67 206 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 EFHBQ8N7U6 833 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 DDI1Q8WTU0 396 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 MYLPFQ96A32 169 aa13.46□□□□□ -0.25
PTCH1-207ENST00000429896 BAZ2AQ9UIF9 1905 aaKnown RBP13.46□□□□□ -0.25
PTCH1-207ENST00000429896 DMTNQ08495 405 aa13.46□□□□□ -0.26
PTCH1-207ENST00000429896 LRRC55Q6ZSA7 311 aa13.46□□□□□ -0.26
PTCH1-207ENST00000429896 PID1Q7Z2X4 250 aa13.46□□□□□ -0.26
PTCH1-207ENST00000429896 LRRC8CQ8TDW0 803 aa13.46□□□□□ -0.26
PTCH1-207ENST00000429896 GRID2IPA4D2P6 1211 aa13.46□□□□□ -0.26
PTCH1-207ENST00000429896 GSTA4O15217 222 aa13.46□□□□□ -0.26
PTCH1-207ENST00000429896 E2F5Q15329 346 aa13.46□□□□□ -0.26
PTCH1-207ENST00000429896 SLC39A5Q6ZMH5 540 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms