RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 INPP5DQ92835 1189 aa9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 ALKBH8Q96BT7 664 aaKnown RBP9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 NLRP4Q96MN2 994 aa9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 CNPY3Q9BT09 278 aa9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 INO80BQ9C086 356 aaPredicted RBP9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 GBA2Q9HCG7 927 aaPredicted RBP9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 TXNRD2Q9NNW7 524 aa9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 SLCO1B3Q9NPD5 702 aa9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 TXLNGQ9NUQ3 528 aa9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 ASNSD1Q9NWL6 643 aa9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 BAIAP2L1Q9UHR4 511 aa9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 USP18Q9UMW8 372 aa9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 CSADQ9Y600 493 aa9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 TEX264Q9Y6I9 313 aa9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 NYNRINQ9P2P1 1898 aaKnown RBP9.13□□□□□ -0.95
TRIM49D1-201ENST00000420869 TANC1Q9C0D5 1861 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 FRMPD3Q5JV73 1810 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 ZNF487B1APH4 448 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 GOLGA8MH3BSY2 632 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 C2CD2LO14523 706 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 CXCL11O14625 94 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 CHADO15335 359 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 SPAG6O75602 509 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 DCTN3O75935 186 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 RNF8O76064 485 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 PGK2P07205 417 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 PFKMP08237 780 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 KRT19P08727 400 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 STAG3L1P0CL83 205 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 RBP3P10745 1247 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 MSH2P43246 934 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 MAGEA6P43360 314 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 NEK3P51956 506 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 OSTNP61366 133 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 PLCB3Q01970 1234 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 SLC18A2Q05940 514 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 ARHGAP1Q07960 439 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 PRKG1Q13976 671 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 DPYSL3Q14195 570 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 SLC10A6Q3KNW5 377 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 FAM47CQ5HY64 1035 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 LCLAT1Q6UWP7 414 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 CAPN12Q6ZSI9 719 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 SH2D5Q6ZV89 423 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 ILDR2Q71H61 639 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 OTOAQ7RTW8 1153 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 CDR2LQ86X02 465 aaPredicted RBP9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 CHSY1Q86X52 802 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 NT5DC4Q86YG4 428 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 TTC39CQ8N584 583 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 AFG1LQ8WV93 481 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 TEKT4Q8WW24 435 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 ZNF75CPQ92670 426 aaPredicted RBP9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 COPS5Q92905 334 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 UTP4Q969X6 686 aaKnown RBP9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 SPATA33Q96N06 139 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 TMEM237Q96Q45 408 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 C10orf88Q9H8K7 445 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 RBPJLQ9UBG7 517 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 XPO7Q9UIA9 1087 aaKnown RBP9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 ITGA11Q9UKX5 1188 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 KIAA1257Q9ULG3 409 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 C2CD2Q9Y426 696 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 GREB1Q4ZG55 1949 aa9.12□□□□□ -0.95
TRIM49D1-201ENST00000420869 SPDYE5A6NIY4 337 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 TRAFD1O14545 582 aaPredicted RBP9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 P4HA1P13674 534 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 EZRP15311 586 aaKnown RBP9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 KRT4P19013 534 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 ADRA1DP25100 572 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 STIP1P31948 543 aaKnown RBP9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 ETV4P43268 484 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 ROR1Q01973 937 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 ORC1Q13415 861 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 TFDP2Q14188 446 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 STILQ15468 1287 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 PKDCCQ504Y2 493 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 SLC45A4Q5BKX6 768 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 FAM102AQ5T9C2 384 aaPredicted RBP9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 HHATQ5VTY9 493 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 MAP1SQ66K74 1059 aaPredicted RBP9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 FAM183BPQ6ZVS7 135 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 PNMA8AQ86V59 439 aaPredicted RBP9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 ERO1BQ86YB8 467 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 IGDCC3Q8IVU1 814 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 PDIK1LQ8N165 341 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 AGGF1Q8N302 714 aaeCLIP9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 KCTD6Q8NC69 237 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 AGAP11Q8TF27 550 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 SLC44A1Q8WWI5 657 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 FAF2Q96CS3 445 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 ERP27Q96DN0 273 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 RNF157Q96PX1 679 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 MMP19Q99542 508 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 ADPGKQ9BRR6 497 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 FRMD8Q9BZ67 464 aaPredicted RBP9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 MIS12Q9H081 205 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 VPS11Q9H270 941 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 USP29Q9HBJ7 922 aa9.11□□□□□ -0.95
TRIM49D1-201ENST00000420869 ERAP1Q9NZ08 941 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms