RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 POLR3BQ9NW08 1133 aaPredicted RBP10.85□□□□□ -0.67
HDLBP-206ENST00000417540 OSER1Q9NX31 292 aa10.85□□□□□ -0.67
HDLBP-206ENST00000417540 RAB20Q9NX57 234 aa10.85□□□□□ -0.67
HDLBP-206ENST00000417540 KANSL1LA0AUZ9 987 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 FAM170AA1A519 330 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 ZNF263O14978 683 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 OAS1P00973 400 aaKnown RBP10.84□□□□□ -0.67
HDLBP-206ENST00000417540 IRF1P10914 325 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 CTHP32929 405 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 RAD23BP54727 409 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 PTPN5P54829 565 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 MCCD1P59942 119 aaPredicted RBP10.84□□□□□ -0.67
HDLBP-206ENST00000417540 MESP2Q0VG99 397 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 FZD5Q13467 585 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 PON2Q15165 354 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 FRMD5Q7Z6J6 570 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 TRIM59Q8IWR1 403 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 ELOA2Q8IYF1 753 aaPredicted RBP10.84□□□□□ -0.67
HDLBP-206ENST00000417540 SH3RF2Q8TEC5 729 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 P2RY11Q96G91 374 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 ZSWIM1Q9BR11 485 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 NMUR1Q9HB89 426 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 KIAA1468Q9P260 1216 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 ARMCX3Q9UH62 379 aaPredicted RBP10.84□□□□□ -0.67
HDLBP-206ENST00000417540 CPQQ9Y646 472 aa10.84□□□□□ -0.67
HDLBP-206ENST00000417540 TRAV19A0A0A6YYK7 116 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 ZNF840PA6NDX5 716 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 SPECC1L-ADORA2AF8WAN1 911 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 DPYSL4O14531 572 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 CHADO15335 359 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 COCHO43405 550 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 FGF19O95750 216 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 OLFM2O95897 454 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 ABL1P00519 1130 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 FAM200BP0CF97 657 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 PNMA6AP0CW24 399 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-206ENST00000417540 AVPR1AP37288 418 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 CLCN5P51795 746 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 PRKCQQ04759 706 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 ENPEPQ07075 957 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 STIM1Q13586 685 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 CUL2Q13617 745 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 MAPRE1Q15691 268 aaKnown RBP10.83□□□□□ -0.68
HDLBP-206ENST00000417540 GAB4Q2WGN9 574 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 PHLDB3Q6NSJ2 640 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 C11orf57Q6ZUT1 292 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-206ENST00000417540 MON1AQ86VX9 555 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 C12orf40Q86WS4 652 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 IRF2BP1Q8IU81 584 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 YAF2Q8IY57 180 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 LMO3Q8TAP4 145 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 NDRG1Q92597 394 aaKnown RBP10.83□□□□□ -0.68
HDLBP-206ENST00000417540 TAF4BQ92750 862 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 EZH1Q92800 747 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-206ENST00000417540 DHTKD1Q96HY7 919 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-206ENST00000417540 CEP63Q96MT8 703 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 KREMEN1Q96MU8 473 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 RNF38Q9H0F5 515 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 INTS2Q9H0H0 1204 aaKnown RBP10.83□□□□□ -0.68
HDLBP-206ENST00000417540 NUP62CLQ9H1M0 184 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 UXTQ9UBK9 157 aaPredicted RBP10.83□□□□□ -0.68
HDLBP-206ENST00000417540 HOOK1Q9UJC3 728 aaKnown RBP10.83□□□□□ -0.68
HDLBP-206ENST00000417540 NUDT5Q9UKK9 219 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 COQ4Q9Y3A0 265 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 R4GN57 208 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 ATP8B3O60423 1300 aa10.83□□□□□ -0.68
HDLBP-206ENST00000417540 FAM170BA6NMN3 283 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 LEFTY2O00292 366 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 P4HA1P13674 534 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 ACO1P21399 889 aaKnown RBP10.82□□□□□ -0.68
HDLBP-206ENST00000417540 BRD2P25440 801 aaKnown RBP10.82□□□□□ -0.68
HDLBP-206ENST00000417540 DDX6P26196 483 aaKnown RBP eCLIP10.82□□□□□ -0.688e-8■■■□□ 16
HDLBP-206ENST00000417540 GTF2H1P32780 548 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 PFKPQ01813 784 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 SATB1Q01826 763 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 DMWDQ09019 674 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 EML3Q32P44 896 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 RRAGAQ7L523 313 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 BHLHA9Q7RTU4 235 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 TFAP2BQ92481 460 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 FAM3CQ92520 227 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 IRF7Q92985 503 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 TNIP3Q96KP6 325 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 FAM83CQ9BQN1 747 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 NT5C1AQ9BXI3 368 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 SRRTQ9BXP5 876 aaKnown RBP10.82□□□□□ -0.68
HDLBP-206ENST00000417540 CSNK1G1Q9HCP0 422 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 ACP6Q9NPH0 428 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 TDP1Q9NUW8 608 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 ARHGAP26Q9UNA1 814 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 SIT1Q9Y3P8 196 aa10.82□□□□□ -0.68
HDLBP-206ENST00000417540 GPR179Q6PRD1 2367 aa10.81□□□□□ -0.68
HDLBP-206ENST00000417540 A0A1W2PQH9 124 aa10.81□□□□□ -0.68
HDLBP-206ENST00000417540 RNF225M0QZC1 329 aaPredicted RBP10.81□□□□□ -0.68
HDLBP-206ENST00000417540 PIK3R2O00459 728 aa10.81□□□□□ -0.68
HDLBP-206ENST00000417540 GFRA3O60609 400 aa10.81□□□□□ -0.68
HDLBP-206ENST00000417540 TBX18O95935 607 aa10.81□□□□□ -0.68
HDLBP-206ENST00000417540 EGFP01133 1207 aa10.81□□□□□ -0.68
HDLBP-206ENST00000417540 CYP17A1P05093 508 aa10.81□□□□□ -0.68
HDLBP-206ENST00000417540 ZDHHC11BP0C7U3 371 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms