RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 BPIFB4P59827 614 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 CDR2Q01850 454 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 DSG1Q02413 1049 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 SMC1AQ14683 1233 aaKnown RBP8.84□□□□□ -0.99
GPC3-203ENST00000406757 ASTE1Q2TB18 679 aaPredicted RBP8.84□□□□□ -0.99
GPC3-203ENST00000406757 C2CD6Q53TS8 623 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 SDHAF4Q5VUM1 108 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 NAA35Q5VZE5 725 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 ZNF280DQ6N043 979 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 RNF19BQ6ZMZ0 732 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 SPATA31D4Q6ZUB0 917 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 TOGARAM2Q6ZUX3 1019 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 TMTC1Q8IUR5 882 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 FUKQ8N0W3 1084 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 TTC39CQ8N584 583 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 WDTC1Q8N5D0 677 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 MRPL43Q8N983 215 aaKnown RBP8.84□□□□□ -0.99
GPC3-203ENST00000406757 KREMEN2Q8NCW0 462 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 STKLD1Q8NE28 680 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 SLC30A5Q8TAD4 765 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 ATRIPQ8WXE1 791 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 CASP10Q92851 521 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 PCED1BQ96HM7 432 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 TNIP3Q96KP6 325 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 CCDC42Q96M95 316 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 PKMYT1Q99640 499 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 SYT11Q9BT88 431 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 ZNF518BQ9C0D4 1074 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 ZBP1Q9H171 429 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 SMOC2Q9H3U7 446 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 POMKQ9H5K3 350 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 TSPAN16Q9UKR8 245 aa8.84□□□□□ -0.99
GPC3-203ENST00000406757 KMT2EQ8IZD2 1858 aa8.83□□□□□ -1
GPC3-203ENST00000406757 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.83□□□□□ -1
GPC3-203ENST00000406757 ARHGEF37A1IGU5 675 aa8.83□□□□□ -1
GPC3-203ENST00000406757 C2orf71A6NGG8 1288 aa8.83□□□□□ -1
GPC3-203ENST00000406757 C2CD4DB7Z1M9 353 aa8.83□□□□□ -1
GPC3-203ENST00000406757 H0Y858 1186 aa8.83□□□□□ -1
GPC3-203ENST00000406757 GFRA3O60609 400 aa8.83□□□□□ -1
GPC3-203ENST00000406757 LILRB3O75022 631 aa8.83□□□□□ -1
GPC3-203ENST00000406757 CLASP2O75122 1294 aaKnown RBP8.83□□□□□ -1
GPC3-203ENST00000406757 VNN2O95498 520 aa8.83□□□□□ -1
GPC3-203ENST00000406757 CTSAP10619 480 aa8.83□□□□□ -1
GPC3-203ENST00000406757 CPB1P15086 417 aa8.83□□□□□ -1
GPC3-203ENST00000406757 FECHP22830 423 aa8.83□□□□□ -1
GPC3-203ENST00000406757 CYP2F1P24903 491 aa8.83□□□□□ -1
GPC3-203ENST00000406757 MAP3K7CLP57077 242 aa8.83□□□□□ -1
GPC3-203ENST00000406757 CDK17Q00537 523 aa8.83□□□□□ -1
GPC3-203ENST00000406757 TSPY1Q01534 308 aa8.83□□□□□ -1
GPC3-203ENST00000406757 PTPN14Q15678 1187 aa8.83□□□□□ -1
GPC3-203ENST00000406757 CNGA2Q16280 664 aa8.83□□□□□ -1
GPC3-203ENST00000406757 CCDC122Q5T0U0 273 aa8.83□□□□□ -1
GPC3-203ENST00000406757 ARHGAP17Q68EM7 881 aa8.83□□□□□ -1
GPC3-203ENST00000406757 CES5AQ6NT32 575 aa8.83□□□□□ -1
GPC3-203ENST00000406757 FAM171BQ6P995 826 aa8.83□□□□□ -1
GPC3-203ENST00000406757 ANKS3Q6ZW76 656 aa8.83□□□□□ -1
GPC3-203ENST00000406757 TTC30AQ86WT1 665 aa8.83□□□□□ -1
GPC3-203ENST00000406757 DCP1BQ8IZD4 617 aaKnown RBP8.83□□□□□ -1
GPC3-203ENST00000406757 C17orf53Q8N3J3 647 aaPredicted RBP8.83□□□□□ -1
GPC3-203ENST00000406757 TTC9BQ8N6N2 239 aa8.83□□□□□ -1
GPC3-203ENST00000406757 C12orf76Q8N812 135 aaPredicted RBP8.83□□□□□ -1
GPC3-203ENST00000406757 ATAD1Q8NBU5 361 aa8.83□□□□□ -1
GPC3-203ENST00000406757 C1orf131Q8NDD1 294 aaKnown RBP8.83□□□□□ -1
GPC3-203ENST00000406757 MYCBPAPQ8TBZ2 947 aa8.83□□□□□ -1
GPC3-203ENST00000406757 GPR152Q8TDT2 470 aa8.83□□□□□ -1
GPC3-203ENST00000406757 PIK3R5Q8WYR1 880 aa8.83□□□□□ -1
GPC3-203ENST00000406757 ATOH1Q92858 354 aaPredicted RBP8.83□□□□□ -1
GPC3-203ENST00000406757 SECISBP2LQ93073 1101 aaKnown RBP8.83□□□□□ -1
GPC3-203ENST00000406757 RIPOR3Q96MK2 946 aa8.83□□□□□ -1
GPC3-203ENST00000406757 KCNK17Q96T54 332 aa8.83□□□□□ -1
GPC3-203ENST00000406757 KCNK16Q96T55 309 aa8.83□□□□□ -1
GPC3-203ENST00000406757 PACSIN1Q9BY11 444 aa8.83□□□□□ -1
GPC3-203ENST00000406757 ADAM7Q9H2U9 754 aa8.83□□□□□ -1
GPC3-203ENST00000406757 CRISPLD1Q9H336 500 aa8.83□□□□□ -1
GPC3-203ENST00000406757 MRPL17Q9NRX2 175 aaKnown RBP8.83□□□□□ -1
GPC3-203ENST00000406757 TMEM30AQ9NV96 361 aa8.83□□□□□ -1
GPC3-203ENST00000406757 ABI2Q9NYB9 513 aaPredicted RBP8.83□□□□□ -1
GPC3-203ENST00000406757 MTRRQ9UBK8 725 aa8.83□□□□□ -1
GPC3-203ENST00000406757 TJP2Q9UDY2 1190 aa8.83□□□□□ -1
GPC3-203ENST00000406757 CHORDC1Q9UHD1 332 aaPredicted RBP8.83□□□□□ -1
GPC3-203ENST00000406757 CYTH4Q9UIA0 394 aa8.83□□□□□ -1
GPC3-203ENST00000406757 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.83□□□□□ -1
GPC3-203ENST00000406757 REXO2Q9Y3B8 237 aaKnown RBP8.83□□□□□ -1
GPC3-203ENST00000406757 NR2E1Q9Y466 385 aa8.83□□□□□ -1
GPC3-203ENST00000406757 BZW2Q9Y6E2 419 aaKnown RBP8.83□□□□□ -1
GPC3-203ENST00000406757 EPN1Q9Y6I3 576 aaPredicted RBP8.83□□□□□ -1
GPC3-203ENST00000406757 SSU72P8A0A1W2PR75 194 aa8.82□□□□□ -1
GPC3-203ENST00000406757 WDR27A2RRH5 827 aa8.82□□□□□ -1
GPC3-203ENST00000406757 MTMR11A4FU01 709 aa8.82□□□□□ -1
GPC3-203ENST00000406757 OR6C75A6NL08 312 aa8.82□□□□□ -1
GPC3-203ENST00000406757 TEX28O15482 410 aa8.82□□□□□ -1
GPC3-203ENST00000406757 MED7O43513 233 aa8.82□□□□□ -1
GPC3-203ENST00000406757 AP1G2O75843 785 aa8.82□□□□□ -1
GPC3-203ENST00000406757 NDUFA10O95299 355 aa8.82□□□□□ -1
GPC3-203ENST00000406757 SEC24AO95486 1093 aa8.82□□□□□ -1
GPC3-203ENST00000406757 ASGR2P07307 311 aa8.82□□□□□ -1
GPC3-203ENST00000406757 CNPP09543 421 aaKnown RBP8.82□□□□□ -1
GPC3-203ENST00000406757 MAGEA1P43355 309 aa8.82□□□□□ -1
GPC3-203ENST00000406757 ROR1Q01973 937 aa8.82□□□□□ -1
GPC3-203ENST00000406757 PDE4CQ08493 712 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms