RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 C1orf210Q8IVY1 113 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 FAM109AQ8N4B1 249 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 SSH3Q8TE77 659 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 ZNF384Q8TF68 577 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 TRIM63Q969Q1 353 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 FAM136AQ96C01 138 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 GRAMD1AQ96CP6 724 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 HIST1H2AAQ96QV6 131 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 HAPLN3Q96S86 360 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 EIF2AK1Q9BQI3 630 aaKnown RBP4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 C17orf80Q9BSJ5 609 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 FAM167BQ9BTA0 163 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 KATNAL1Q9BW62 490 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 TRIM5Q9C035 493 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 GALNT9Q9HCQ5 603 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 FSCN3Q9NQT6 498 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 VPS45Q9NRW7 570 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 DNAJB11Q9UBS4 358 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 VPS51Q9UID3 782 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 NEU2Q9Y3R4 380 aa4.55□□□□□ -1.68
HMGB1P17-201ENST00000403495 CENPVL1A0A0U1RR11 272 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 HMX3A6NHT5 357 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 J3KTA2 159 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 ITGA5P08648 1049 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 PPIFP30405 207 aaKnown RBP4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 PDE6CP51160 858 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 PRKAA2P54646 552 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 SCAPQ12770 1279 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 GRM4Q14833 912 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 CDSNQ15517 529 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 BTBD16Q32M84 506 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 ICE2Q659A1 982 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 KLHL17Q6TDP4 642 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 MAVSQ7Z434 540 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 GPR149Q86SP6 731 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 GATAD2AQ86YP4 633 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 ABRAQ8N0Z2 381 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 METTL25Q8N6Q8 603 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 TOR1AIP2Q8NFQ8 470 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 SCAMP5Q8TAC9 235 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 MYCBPAPQ8TBZ2 947 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 OSCP1Q8WVF1 389 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 ATRIPQ8WXE1 791 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 ASB10Q8WXI3 467 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 RUBCNQ92622 972 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 GLG1Q92896 1179 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 PTCD3Q96EY7 689 aaKnown RBP4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 MCRS1Q96EZ8 462 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 KRTAP17-1Q9BYP8 105 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 ZBTB26Q9HCK0 441 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 SLC2A4RGQ9NR83 387 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 INTS13Q9NVM9 706 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 SMPD4Q9NXE4 827 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 DKK3Q9UBP4 350 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 SRP68Q9UHB9 627 aaKnown RBP4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 DTNAQ9Y4J8 743 aa4.54□□□□□ -1.68
HMGB1P17-201ENST00000403495 SPATA31A3Q5VYP0 1347 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 VWC2LB2RUY7 222 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 B9A039 149 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 EIF3FO00303 357 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 ZSCAN9O15535 394 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 SH3BP5O60239 455 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 SOAT2O75908 522 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 HLA-DOAP06340 250 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 PYGLP06737 847 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 PEPDP12955 493 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 JUPP14923 745 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 PRKAR1BP31321 381 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 NSUN2Q08J23 767 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 PPFIA1Q13136 1202 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 FZD5Q13467 585 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 CCNIQ14094 377 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 CERCAMQ5T4B2 595 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 ARL6IP4Q66PJ3 421 aaKnown RBP4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 USP17L6PQ6QN14 398 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 TTLL10Q6ZVT0 673 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 MOGAT3Q86VF5 341 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 RASGRP3Q8IV61 690 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 COLGALT2Q8IYK4 626 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 IZUMO1Q8IYV9 350 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 GALNT15Q8N3T1 639 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 B3GALNT2Q8NCR0 500 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 CSGALNACT1Q8TDX6 532 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 SLC25A43Q8WUT9 341 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 GCC1Q96CN9 775 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 R3HDM4Q96D70 268 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 BOD1Q96IK1 185 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 FAM227BQ96M60 508 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 PLEKHG4BQ96PX9 1271 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 GPR20Q99678 358 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 ISCA1Q9BUE6 129 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 KRTAP3-1Q9BYR8 98 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 FAM83DQ9H4H8 585 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 RGS17Q9UGC6 210 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 RIMKLBQ9ULI2 386 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 SLC27A6Q9Y2P4 619 aa4.53□□□□□ -1.68
HMGB1P17-201ENST00000403495 FER1L4A9Z1Z3 1794 aa4.53□□□□□ -1.69
HMGB1P17-201ENST00000403495 GAGE12BA1L429 117 aa4.52□□□□□ -1.69
HMGB1P17-201ENST00000403495 GAGE12HA6NDE8 117 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms