RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 DACT3Q96B18 629 aaPredicted RBP11.46□□□□□ -0.57
HPS4-202ENST00000398145 CNPY3Q9BT09 278 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 SIK2Q9H0K1 926 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 NRDE2Q9H7Z3 1164 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 H0Y626 953 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 TPST1O60507 370 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 TRIM16O95361 564 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 FAM200BP0CF97 657 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 GFAPP14136 432 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 HSD17B4P51659 736 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 TMEM132DQ14C87 1099 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 NUP93Q8N1F7 819 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 CLEC4FQ8N1N0 589 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 TTLL6Q8N841 843 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 FAM151AQ8WW52 585 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 SHC3Q92529 594 aa11.46□□□□□ -0.57
HPS4-202ENST00000398145 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.46□□□□□ -0.57
HPS4-202ENST00000398145 C5orf60A6NFR6 353 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 OGTO15294 1046 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 IL18RAPO95256 599 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 TNFAIP8O95379 198 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 ICAM1P05362 532 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 DLG4P78352 724 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 EVX2Q03828 476 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 NSUN2Q08J23 767 aaKnown RBP eCLIP11.46□□□□□ -0.58
HPS4-202ENST00000398145 SLC9A9Q8IVB4 645 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 KYQ8NBH2 561 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 GMCL1P1Q8NEA9 526 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 TFB1MQ8WVM0 346 aaKnown RBP11.46□□□□□ -0.58
HPS4-202ENST00000398145 LZICQ8WZA0 190 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 PWWP2AQ96N64 755 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 CGRRF1Q99675 332 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 MTMR12Q9C0I1 747 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 APPL1Q9UKG1 709 aa11.46□□□□□ -0.58
HPS4-202ENST00000398145 ATP8B3O60423 1300 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 MROH7Q68CQ1 1323 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 GH1P01241 217 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 SERPINE1P05121 402 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 RGS2P41220 211 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 SULT1E1P49888 294 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 PDAP1Q13442 181 aaKnown RBP11.45□□□□□ -0.58
HPS4-202ENST00000398145 BLMHQ13867 455 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 NPY5RQ15761 445 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 BMT2Q1RMZ1 405 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 Q3C1V9 767 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 TCHHL1Q5QJ38 904 aaPredicted RBP11.45□□□□□ -0.58
HPS4-202ENST00000398145 CDR2LQ86X02 465 aaPredicted RBP11.45□□□□□ -0.58
HPS4-202ENST00000398145 PPHLN1Q8NEY8 458 aaKnown RBP11.45□□□□□ -0.58
HPS4-202ENST00000398145 FAM163AQ96GL9 167 aaPredicted RBP11.45□□□□□ -0.58
HPS4-202ENST00000398145 ZFRQ96KR1 1074 aaKnown RBP11.45□□□□□ -0.58
HPS4-202ENST00000398145 BEGAINQ9BUH8 593 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 FAM49BQ9NUQ9 324 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 GID8Q9NWU2 228 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 A8MUI8 341 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 DDX3YO15523 660 aaKnown RBP11.45□□□□□ -0.58
HPS4-202ENST00000398145 PROCP04070 461 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 TGM2P21980 687 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 SERPINB8P50452 374 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 PSMD7P51665 324 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 PPIDQ08752 370 aaKnown RBP11.45□□□□□ -0.58
HPS4-202ENST00000398145 KBTBD12Q3ZCT8 623 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 ZBTB41Q5SVQ8 909 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 ATF7IP2Q5U623 682 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 GPRASP2Q96D09 838 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 SIKE1Q9BRV8 207 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 DDX18Q9NVP1 670 aaKnown RBP11.45□□□□□ -0.58
HPS4-202ENST00000398145 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.45□□□□□ -0.58
HPS4-202ENST00000398145 TGFB1I1O43294 461 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 TIMM44O43615 452 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 RAG1P15918 1043 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 NEK2P51955 445 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 CCDC15Q0P6D6 951 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 PTK2BQ14289 1009 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 ECM1Q16610 540 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 HYIQ5T013 277 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 OTOAQ7RTW8 1153 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 PIGWQ7Z7B1 504 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 ECHDC2Q86YB7 292 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 ELMO3Q96BJ8 720 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 TSPAN17Q96FV3 270 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 SPATA33Q96N06 139 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 POLLQ9UGP5 575 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 MYO5BQ9ULV0 1848 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 CYP3A7-CYP3A51PA0A087WV96 503 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 TISP43B9A030 160 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 PSMD3O43242 534 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 APOA1P02647 267 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 CYP3A7P24462 503 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 FMO1Q01740 532 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 MTMR2Q13614 643 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 ITGA9Q13797 1035 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 KRT27Q7Z3Y8 459 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 PYDC1Q8WXC3 89 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 ZNF560Q96MR9 790 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 FGFBP2Q9BYJ0 223 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 TCF7L2Q9NQB0 619 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 ARHGEF38Q9NXL2 777 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 BTBD7Q9P203 1132 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 SORCS3Q9UPU3 1222 aa11.45□□□□□ -0.58
HPS4-202ENST00000398145 MEI4A8MW99 385 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms