RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 C9IYK1 514 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 KBTBD13C9JR72 458 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 TUBBP07437 444 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 ZSCAN5DPP0CG00 497 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 MCM3P25205 808 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 PBX3P40426 434 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 NRLP54845 237 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 PLTPP55058 493 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 CCL23P55773 120 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 SLC6A3Q01959 620 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 PPARDQ03181 441 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 CA9Q16790 459 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 ZC3H12AQ5D1E8 599 aaKnown RBP15.7■□□□□ 0.1
MKS1-202ENST00000393119 OR2W6PQ8NHA6 318 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 PCED1BQ96HM7 432 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 TSEN34Q9BSV6 310 aaKnown RBP15.7■□□□□ 0.1
MKS1-202ENST00000393119 MED10Q9BTT4 135 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 NGRNQ9NPE2 291 aaKnown RBP15.7■□□□□ 0.1
MKS1-202ENST00000393119 SLC38A7Q9NVC3 462 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 PHF24Q9UPV7 400 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 UTP11Q9Y3A2 253 aaKnown RBP15.7■□□□□ 0.1
MKS1-202ENST00000393119 MAP3K6O95382 1288 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 GNRH1P01148 92 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 OR4Q2P0C623 313 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 GPD1P21695 349 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 CHRNA3P32297 505 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 CDKN2BP42772 138 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 CDK7P50613 346 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 ADIGQ0VDE8 80 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 BST2Q10589 180 aaKnown RBP15.7■□□□□ 0.1
MKS1-202ENST00000393119 CYP1B1Q16678 543 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 MAP9Q49MG5 647 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 PPP1R2P3Q6NXS1 205 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 HFE2Q6ZVN8 426 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 LRRC8DQ7L1W4 858 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 LRRTM3Q86VH5 581 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 FAM126BQ8IXS8 530 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 HACE1Q8IYU2 909 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 NIPA2Q8N8Q9 360 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 PIK3R5Q8WYR1 880 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 B3GALT6Q96L58 329 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 RGS18Q9NS28 235 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 DNPEPQ9ULA0 475 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 MTUS1Q9ULD2 1270 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 USP18Q9UMW8 372 aa15.7■□□□□ 0.1
MKS1-202ENST00000393119 SYNJ2BP-COX16A0A087WUM0 186 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 TRUB2O95900 331 aaKnown RBP15.69■□□□□ 0.1
MKS1-202ENST00000393119 SYF2O95926 243 aaKnown RBP15.69■□□□□ 0.1
MKS1-202ENST00000393119 TNFRSF8P28908 595 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 AARSP49588 968 aaKnown RBP eCLIP15.69■□□□□ 0.1
MKS1-202ENST00000393119 ZNF143P52747 638 aaPredicted RBP15.69■□□□□ 0.1
MKS1-202ENST00000393119 ZDHHC24Q6UX98 284 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 CLEC20AQ6ZU45 233 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 CCDC33Q8N5R6 958 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 FBXO25Q8TCJ0 367 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 CCDC114Q96M63 670 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 LRRC19Q9H756 370 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 KRT82Q9NSB4 513 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 GRHL1Q9NZI5 618 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 COX16Q9P0S2 106 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 WDR35Q9P2L0 1181 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 PCYOX1Q9UHG3 505 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 PRG3Q9Y2Y8 225 aaPredicted RBP15.69■□□□□ 0.1
MKS1-202ENST00000393119 hCG_1818297A0A087WSY0 165 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 TAP1Q03518 808 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 KRT17Q04695 432 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 TTC39CQ8N584 583 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 TAB3Q8N5C8 712 aaPredicted RBP15.69■□□□□ 0.1
MKS1-202ENST00000393119 GOLGA6L1Q8N7Z2 621 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 ZMIZ2Q8NF64 920 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 OR10T2Q8NGX3 314 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 DIS3LQ8TF46 1054 aaKnown RBP15.69■□□□□ 0.1
MKS1-202ENST00000393119 FAM172AQ8WUF8 416 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 SMOQ99835 787 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 SYT15Q9BQS2 421 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 PPP1R12CQ9BZL4 782 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 MED4Q9NPJ6 270 aa15.69■□□□□ 0.1
MKS1-202ENST00000393119 DNAJC17Q9NVM6 304 aaKnown RBP15.69■□□□□ 0.1
MKS1-202ENST00000393119 TET1Q8NFU7 2136 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 TP73O15350 636 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 CCL5P13501 91 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 BCAT1P54687 386 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 GSCP56915 257 aaPredicted RBP15.68■□□□□ 0.1
MKS1-202ENST00000393119 UAP1Q16222 522 aaPredicted RBP15.68■□□□□ 0.1
MKS1-202ENST00000393119 NPNTQ6UXI9 565 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 RCOR2Q8IZ40 523 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 NETO2Q8NC67 525 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 SEC14L1Q92503 715 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 TRAIPQ9BWF2 469 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 VIPAS39Q9H9C1 493 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 ZDHHC18Q9NUE0 388 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 NRP1O14786 923 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 KDELR1P24390 212 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 TTC31Q49AM3 519 aaPredicted RBP15.68■□□□□ 0.1
MKS1-202ENST00000393119 TNIP3Q96KP6 325 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 ZIM3Q96PE6 472 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 HNRNPABQ99729 332 aaKnown RBP15.68■□□□□ 0.1
MKS1-202ENST00000393119 CALN1Q9BXU9 219 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 DUSP16Q9BY84 665 aa15.68■□□□□ 0.1
MKS1-202ENST00000393119 PAK6Q9NQU5 681 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms