RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 IKZF4Q9H2S9 585 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 SCUBE2Q9NQ36 999 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 AGO2Q9UKV8 859 aaKnown RBP18.57■□□□□ 0.56
HMGN1-203ENST00000380748 CPQQ9Y646 472 aa18.57■□□□□ 0.56
HMGN1-203ENST00000380748 IGHV1OR15-9A0A0B4J2B8 117 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 HUS1O60921 280 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 FAM13AO94988 1023 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 ADH5P11766 374 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 PNPLA4P41247 253 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 TNFRSF4P43489 277 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 NEK4P51957 841 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 ZNF131P52739 623 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 SLCO6A1Q86UG4 719 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 GPBP1Q86WP2 473 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 TRIML1Q8N9V2 468 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 FUBP3Q96I24 572 aaKnown RBP eCLIP18.56■□□□□ 0.56
HMGN1-203ENST00000380748 FAM84AQ96KN4 292 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 FIZ1Q96SL8 496 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 AGAP1Q9UPQ3 857 aa18.56■□□□□ 0.56
HMGN1-203ENST00000380748 TULP1O00294 542 aaPredicted RBP18.55■□□□□ 0.56
HMGN1-203ENST00000380748 TRAK2O60296 914 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 ITGB3P05106 788 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 PFKLP17858 780 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 SCP2P22307 547 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 MAGEA11P43364 429 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 SLC7A9P82251 487 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 DHX8Q14562 1220 aaKnown RBP18.55■□□□□ 0.56
HMGN1-203ENST00000380748 PLEKHG6Q3KR16 790 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 TOGARAM2Q6ZUX3 1019 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 TMEM86AQ8N2M4 240 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 KCTD17Q8N5Z5 321 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 C1orf127Q8N9H9 656 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 SPRYD3Q8NCJ5 442 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 GLIS3Q8NEA6 775 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 ERLEC1Q96DZ1 483 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 CRELD1Q96HD1 420 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 CDK5RAP3Q96JB5 506 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 PARVGQ9HBI0 331 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.55■□□□□ 0.56
HMGN1-203ENST00000380748 CACNA2D2Q9NY47 1150 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 TRPM5Q9NZQ8 1165 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 CFAP97Q9P2B7 532 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 APOBEC2Q9Y235 224 aaKnown RBP18.55■□□□□ 0.56
HMGN1-203ENST00000380748 STYXL1Q9Y6J8 313 aa18.55■□□□□ 0.56
HMGN1-203ENST00000380748 A0A1W2PQD8 194 aa18.54■□□□□ 0.56
HMGN1-203ENST00000380748 SLC9A3R1O14745 358 aaPredicted RBP18.54■□□□□ 0.56
HMGN1-203ENST00000380748 ATP2C2O75185 946 aa18.54■□□□□ 0.56
HMGN1-203ENST00000380748 ADH1CP00326 375 aa18.54■□□□□ 0.56
HMGN1-203ENST00000380748 WASP42768 502 aa18.54■□□□□ 0.56
HMGN1-203ENST00000380748 TFAMQ00059 246 aaKnown RBP18.54■□□□□ 0.56
HMGN1-203ENST00000380748 GTF2BQ00403 316 aa18.54■□□□□ 0.56
HMGN1-203ENST00000380748 ADGRF2Q8IZF7 708 aa18.54■□□□□ 0.56
HMGN1-203ENST00000380748 ZNF513Q8N8E2 541 aaPredicted RBP18.54■□□□□ 0.56
HMGN1-203ENST00000380748 KIAA1958Q8N8K9 716 aa18.54■□□□□ 0.56
HMGN1-203ENST00000380748 SPATA17Q96L03 361 aa18.54■□□□□ 0.56
HMGN1-203ENST00000380748 ZHX3Q9H4I2 956 aa18.54■□□□□ 0.56
HMGN1-203ENST00000380748 HCN2Q9UL51 889 aa18.54■□□□□ 0.56
HMGN1-203ENST00000380748 CYP8B1Q9UNU6 501 aa18.54■□□□□ 0.56
HMGN1-203ENST00000380748 TBC1D3BA6NDS4 549 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 ZNF840PA6NDX5 716 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.53■□□□□ 0.56
HMGN1-203ENST00000380748 GABRDO14764 452 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 CBFA2T3O75081 653 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 IL18RAPO95256 599 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 OLFM2O95897 454 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 PRB1P04280 392 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 HOXB2P14652 356 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 PCSK1P29120 753 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 PSMC1P62191 440 aaKnown RBP18.53■□□□□ 0.56
HMGN1-203ENST00000380748 GRIK2Q13002 908 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 LY6G5CQ5SRR4 150 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 SLFN12LQ6IEE8 588 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 FAM171BQ6P995 826 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 NT5DC4Q86YG4 428 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 MARCH9Q86YJ5 346 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 MIB1Q86YT6 1006 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 NAT16Q8N8M0 369 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 CXorf38Q8TB03 319 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 MYLPFQ96A32 169 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 CD93Q9NPY3 652 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 SNX9Q9Y5X1 595 aa18.53■□□□□ 0.56
HMGN1-203ENST00000380748 TENM4Q6N022 2769 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 A0A1W2PQF6 199 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 VWA3AA6NCI4 1184 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 ABL1P00519 1130 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 OAS1P00973 400 aaKnown RBP18.52■□□□□ 0.56
HMGN1-203ENST00000380748 PLCG1P19174 1290 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 NDUFV2P19404 249 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 BDNFP23560 247 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 ADSSP30520 456 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 POU5F1Q01860 360 aaKnown RBP18.52■□□□□ 0.56
HMGN1-203ENST00000380748 DENND5BQ6ZUT9 1274 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 TRMT11Q7Z4G4 463 aaKnown RBP18.52■□□□□ 0.56
HMGN1-203ENST00000380748 GLRX5Q86SX6 157 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 ETFBKMTQ8IXQ9 262 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 RGL4Q8IZJ4 473 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 POMGNT1Q8WZA1 660 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 LLPHQ9BRT6 129 aaKnown RBP18.52■□□□□ 0.56
HMGN1-203ENST00000380748 TTLL2Q9BWV7 592 aa18.52■□□□□ 0.56
HMGN1-203ENST00000380748 GDAP2Q9NXN4 497 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms