RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 PSMD3O43242 534 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 SOAT2O75908 522 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 TGM2P21980 687 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 CYP24A1Q07973 514 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 RSBN1Q5VWQ0 802 aaPredicted RBP12.85□□□□□ -0.35
CHD3-203ENST00000380358 KIAA1324Q6UXG2 1013 aaKnown RBP12.85□□□□□ -0.35
CHD3-203ENST00000380358 RCOR2Q8IZ40 523 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 TFB1MQ8WVM0 346 aaKnown RBP12.85□□□□□ -0.35
CHD3-203ENST00000380358 GPRC5DQ9NZD1 345 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 PLA2G6O60733 806 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 CD4P01730 458 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 SRP54P61011 504 aaKnown RBP12.85□□□□□ -0.35
CHD3-203ENST00000380358 SFSWAPQ12872 951 aaKnown RBP12.85□□□□□ -0.35
CHD3-203ENST00000380358 ACOT1Q86TX2 421 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 POLR1BQ9H9Y6 1135 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 SLC35C2Q9NQQ7 365 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 TMEM39AQ9NV64 488 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 B2RBV5 119 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 IFNAR1P17181 557 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 AMD1P17707 334 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 PEX5P50542 639 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 BIKQ13323 160 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 TCEAL5Q5H9L2 206 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 KCNT1Q5JUK3 1230 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 OR6B1O95007 311 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 CD2BP2O95400 341 aaKnown RBP12.85□□□□□ -0.35
CHD3-203ENST00000380358 CNPP09543 421 aaKnown RBP12.85□□□□□ -0.35
CHD3-203ENST00000380358 MSH3P20585 1137 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 SREBF2Q12772 1141 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 CYP20A1Q6UW02 462 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 SPATA21Q7Z572 469 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 GPRC5AQ8NFJ5 357 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 OLFM3Q96PB7 478 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 CAMKK2Q96RR4 588 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 CHKBQ9Y259 395 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 KIAA0586Q9BVV6 1533 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 HSD3B2P26439 372 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 COQ7Q99807 217 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 ATXN3LQ9H3M9 355 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 MAFFQ9ULX9 164 aa12.85□□□□□ -0.35
CHD3-203ENST00000380358 SNPHO15079 494 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 CCDC130P13994 396 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 RAG1P15918 1043 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 RHOAP61586 193 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 OTUD4Q01804 1114 aaKnown RBP12.84□□□□□ -0.35
CHD3-203ENST00000380358 UGT3A1Q6NUS8 523 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 RBM23Q86U06 439 aaKnown RBP12.84□□□□□ -0.35
CHD3-203ENST00000380358 CBWD2Q8IUF1 395 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 LGALS16A8MUM7 142 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 ZNF286BP0CG31 522 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 GPD1P21695 349 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 TTC39BQ5VTQ0 682 aaPredicted RBP12.84□□□□□ -0.35
CHD3-203ENST00000380358 HPS6Q86YV9 775 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 COLGALT2Q8IYK4 626 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 SPPL2AQ8TCT8 520 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 PIGKQ92643 395 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 PHF21BQ96EK2 531 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 BBS4Q96RK4 519 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 SEPHS2Q99611 448 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 TLR8Q9NR97 1041 aaKnown RBP12.84□□□□□ -0.35
CHD3-203ENST00000380358 RGS18Q9NS28 235 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 TBC1D23Q9NUY8 699 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 DPP3Q9NY33 737 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 H3BN98 237 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 TP73O15350 636 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 CCNG1P51959 295 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 CEBPGP53567 150 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 EDRF1Q3B7T1 1238 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 TTLL9Q3SXZ7 439 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 CELF4Q9BZC1 486 aaKnown RBP12.84□□□□□ -0.35
CHD3-203ENST00000380358 BLOC1S6Q9UL45 172 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 HNF4AP41235 474 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 KLK7P49862 253 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 EPHB3P54753 998 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 PTK6Q13882 451 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 SNRNP35Q16560 246 aaKnown RBP12.84□□□□□ -0.35
CHD3-203ENST00000380358 CYP4Z1Q86W10 505 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 CDK20Q8IZL9 346 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 FIG4Q92562 907 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 BHLHE41Q9C0J9 482 aaPredicted RBP12.84□□□□□ -0.35
CHD3-203ENST00000380358 CLPBQ9H078 707 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 DNAJC5BQ9UF47 199 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 MROH7-TTC4A0A0A0MT08 1334 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 CST8O60676 142 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 GUCY1B2O75343 617 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 PNMA6AP0CW24 399 aaPredicted RBP12.84□□□□□ -0.35
CHD3-203ENST00000380358 PGBD2Q6P3X8 592 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 FAM171BQ6P995 826 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 MYO1HQ8N1T3 1032 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 SLC38A7Q9NVC3 462 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 AXIN2Q9Y2T1 843 aa12.84□□□□□ -0.35
CHD3-203ENST00000380358 OPLAHO14841 1288 aa12.83□□□□□ -0.35
CHD3-203ENST00000380358 ZNF24P17028 368 aa12.83□□□□□ -0.35
CHD3-203ENST00000380358 PCSK1P29120 753 aa12.83□□□□□ -0.35
CHD3-203ENST00000380358 SPRP35270 261 aaPredicted RBP12.83□□□□□ -0.35
CHD3-203ENST00000380358 EFNA5P52803 228 aa12.83□□□□□ -0.35
CHD3-203ENST00000380358 DMPKQ09013 629 aa12.83□□□□□ -0.35
CHD3-203ENST00000380358 ARSJQ5FYB0 599 aaPredicted RBP12.83□□□□□ -0.35
CHD3-203ENST00000380358 ULK3Q6PHR2 472 aa12.83□□□□□ -0.35
CHD3-203ENST00000380358 DNAJC14Q6Y2X3 702 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms