RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ZBTB41Q5SVQ8 909 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 RASSF3Q86WH2 238 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 ST13P4Q8IZP2 240 aaPredicted RBP17.21■□□□□ 0.35
TRIM39-201ENST00000376656 OR6Y1Q8NGX8 325 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 OPTNQ96CV9 577 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 CCDC28BQ9BUN5 200 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 CNTN6Q9UQ52 1028 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 PPME1Q9Y570 386 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 LY75O60449 1722 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 OPHN1O60890 802 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 WEE2P0C1S8 567 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 MYCLP12524 364 aaPredicted RBP17.21■□□□□ 0.35
TRIM39-201ENST00000376656 LIG4P49917 911 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 MRPS5P82675 430 aaKnown RBP17.21■□□□□ 0.35
TRIM39-201ENST00000376656 LSAMPQ13449 338 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 LPCAT4Q643R3 524 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 ACAD11Q709F0 780 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 PODNQ7Z5L7 613 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 PDSS2Q86YH6 399 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 CTAGE3PQ8IX95 158 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 EBF4Q9BQW3 602 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 GLIS2Q9BZE0 524 aaPredicted RBP17.21■□□□□ 0.35
TRIM39-201ENST00000376656 SLC13A1Q9BZW2 595 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 SCN9AQ15858 1988 aa17.21■□□□□ 0.35
TRIM39-201ENST00000376656 A0A088AWK7 358 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 WDR64B1ANS9 1081 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 TSHRP16473 764 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 HNRNPDQ14103 355 aaKnown RBP17.21■□□□□ 0.34
TRIM39-201ENST00000376656 DPYSL3Q14195 570 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 ZNF394Q53GI3 561 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 BBS12Q6ZW61 710 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 ARFGAP1Q8N6T3 406 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 CLEC4DQ8WXI8 215 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 DTNBP1Q96EV8 351 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 CFAP36Q96G28 342 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 MASTLQ96GX5 879 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 RILPQ96NA2 401 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 HAPLN2Q9GZV7 340 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 S100A14Q9HCY8 104 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 PLLPQ9Y342 182 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 TEX264Q9Y6I9 313 aa17.21■□□□□ 0.34
TRIM39-201ENST00000376656 GOLGB1Q14789 3259 aaKnown RBP17.2■□□□□ 0.34
TRIM39-201ENST00000376656 A6NJR5 290 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 ENPEPQ07075 957 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 TEX44Q53QW1 395 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 OR5B17Q8NGF7 314 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 FAM172AQ8WUF8 416 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 HOMER2Q9NSB8 354 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 IL1RAPL1Q9NZN1 696 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 CXorf49A8MYA2 514 aaPredicted RBP17.2■□□□□ 0.34
TRIM39-201ENST00000376656 ENTPD3O75355 529 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 C6orf222P0C671 652 aaPredicted RBP17.2■□□□□ 0.34
TRIM39-201ENST00000376656 CPOXP36551 454 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 SLC25A3Q00325 362 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 SLC25A11Q02978 314 aaKnown RBP17.2■□□□□ 0.34
TRIM39-201ENST00000376656 ZBTB45Q96K62 511 aaPredicted RBP17.2■□□□□ 0.34
TRIM39-201ENST00000376656 PRMT6Q96LA8 375 aaPredicted RBP17.2■□□□□ 0.34
TRIM39-201ENST00000376656 TAAR1Q96RJ0 339 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 TMX4Q9H1E5 349 aaPredicted RBP17.2■□□□□ 0.34
TRIM39-201ENST00000376656 DEFB129Q9H1M3 183 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 COMMD3-BMI1R4GMX3 469 aa17.2■□□□□ 0.34
TRIM39-201ENST00000376656 ZNF862O60290 1169 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 FKBP6O75344 327 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 JAK3P52333 1124 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 MSLNQ13421 630 aaPredicted RBP17.19■□□□□ 0.34
TRIM39-201ENST00000376656 STRIP1Q5VSL9 837 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 TTC39BQ5VTQ0 682 aaPredicted RBP17.19■□□□□ 0.34
TRIM39-201ENST00000376656 PPP1R2P3Q6NXS1 205 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 KYAT3Q6YP21 454 aaKnown RBP17.19■□□□□ 0.34
TRIM39-201ENST00000376656 DHDDSQ86SQ9 333 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 FAM160B2Q86V87 743 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 WDTC1Q8N5D0 677 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 OLFM3Q96PB7 478 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 SMYD3Q9H7B4 428 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 AGO2Q9UKV8 859 aaKnown RBP17.19■□□□□ 0.34
TRIM39-201ENST00000376656 SORBS2O94875 1100 aaKnown RBP17.19■□□□□ 0.34
TRIM39-201ENST00000376656 C1QAP02745 245 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 KDELR1P24390 212 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 PSMA2P25787 234 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 RFC1P35251 1148 aaPredicted RBP17.19■□□□□ 0.34
TRIM39-201ENST00000376656 EIF3EP60228 445 aaKnown RBP17.19■□□□□ 0.34
TRIM39-201ENST00000376656 BMPR2Q13873 1038 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 PABPC1LQ4VXU2 614 aaKnown RBP17.19■□□□□ 0.34
TRIM39-201ENST00000376656 ATG16L1Q676U5 607 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 SLC26A11Q86WA9 606 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 TTC13Q8NBP0 860 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 NAT14Q8WUY8 206 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 XPNPEP1Q9NQW7 623 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 RBAKQ9NYW8 714 aaPredicted RBP17.19■□□□□ 0.34
TRIM39-201ENST00000376656 SIRPGQ9P1W8 387 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 ARHGAP42A6NI28 874 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 CREB3O43889 395 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 LRCH4O75427 683 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 ITGBL1O95965 494 aaPredicted RBP17.19■□□□□ 0.34
TRIM39-201ENST00000376656 CCNFP41002 786 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 ZNF132P52740 706 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 MAP3K10Q02779 954 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 ZCCHC23Q6ZST2 131 aa17.19■□□□□ 0.34
TRIM39-201ENST00000376656 NUDCD3Q8IVD9 361 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms