RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 ADAM7Q9H2U9 754 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 HEY1Q9Y5J3 304 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 NRCAMQ92823 1304 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 SYNJ2BP-COX16A0A087WUM0 186 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 RRN3P2A6NIE6 340 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 A6NJR5 290 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 F2P00734 622 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 IGFBP6P24592 240 aaPredicted RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 ATXN1P54253 815 aaKnown RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 GRIK3Q13003 919 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 ZNF268Q14587 947 aaPredicted RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 ZC3H12AQ5D1E8 599 aaKnown RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 LRRC38Q5VT99 294 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 TWF2Q6IBS0 349 aaKnown RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 CYP4X1Q8N118 509 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 BEST2Q8NFU1 509 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 SNX27Q96L92 541 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 MAK16Q9BXY0 300 aaKnown RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 MAGEB5Q9BZ81 275 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 INTS9Q9NV88 658 aaKnown RBP19.15■□□□□ 0.66
RXRB-202ENST00000374685 COX16Q9P0S2 106 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 HESX1Q9UBX0 185 aa19.15■□□□□ 0.66
RXRB-202ENST00000374685 C3orf70A6NLC5 250 aaPredicted RBP19.14■□□□□ 0.65
RXRB-202ENST00000374685 PFKMP08237 780 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 TFE3P19532 575 aaPredicted RBP19.14■□□□□ 0.65
RXRB-202ENST00000374685 GPD1P21695 349 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 MAGEA4P43358 317 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 PSEN2P49810 448 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 RABGGTBP53611 331 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 IFT88Q13099 833 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 DCAF4L1Q3SXM0 396 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 FAM47CQ5HY64 1035 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 SRRM1Q8IYB3 904 aaKnown RBP19.14■□□□□ 0.65
RXRB-202ENST00000374685 GDAP1Q8TB36 358 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 NDRG1Q92597 394 aaKnown RBP19.14■□□□□ 0.65
RXRB-202ENST00000374685 PGM2Q96G03 612 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 ZFP42Q96MM3 310 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 AP5M1Q9H0R1 490 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 GNEQ9Y223 722 aaKnown RBP19.14■□□□□ 0.65
RXRB-202ENST00000374685 BASP1P80723 227 aaKnown RBP19.14■□□□□ 0.65
RXRB-202ENST00000374685 SNX17Q15036 470 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 TMED2Q15363 201 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 EXOC3L1Q86VI1 746 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 UNC45BQ8IWX7 931 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 CCDC13Q8IYE1 715 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 NIPA2Q8N8Q9 360 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 SPATA18Q8TC71 538 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 WDR35Q9P2L0 1181 aa19.14■□□□□ 0.65
RXRB-202ENST00000374685 SPTLC1O15269 473 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 PRPSAP2O60256 369 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 ACAT1P24752 427 aaKnown RBP19.13■□□□□ 0.65
RXRB-202ENST00000374685 KRT81Q14533 505 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 ZKSCAN8Q15776 578 aaPredicted RBP19.13■□□□□ 0.65
RXRB-202ENST00000374685 SOWAHAQ2M3V2 549 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 SPDYCQ5MJ68 293 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.13■□□□□ 0.65
RXRB-202ENST00000374685 SLC24A3Q9HC58 644 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 ASNSD1Q9NWL6 643 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 GGA2Q9UJY4 613 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 MYADML2A6NDP7 307 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 MEIS3P2A8K0S8 358 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 DNALI1O14645 258 aaPredicted RBP19.13■□□□□ 0.65
RXRB-202ENST00000374685 TRAPPC3O43617 180 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 TRUB2O95900 331 aaKnown RBP19.13■□□□□ 0.65
RXRB-202ENST00000374685 VIMP08670 466 aaKnown RBP19.13■□□□□ 0.65
RXRB-202ENST00000374685 EIF3EP60228 445 aaKnown RBP19.13■□□□□ 0.65
RXRB-202ENST00000374685 LMNB2Q03252 620 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 OASLQ15646 514 aaKnown RBP19.13■□□□□ 0.65
RXRB-202ENST00000374685 ANKRD22Q5VYY1 191 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 HIBCHQ6NVY1 386 aaPredicted RBP19.13■□□□□ 0.65
RXRB-202ENST00000374685 LCLAT1Q6UWP7 414 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 MCRS1Q96EZ8 462 aa19.13■□□□□ 0.65
RXRB-202ENST00000374685 XPO6Q96QU8 1125 aaKnown RBP19.13■□□□□ 0.65
RXRB-202ENST00000374685 TPX2Q9ULW0 747 aaKnown RBP19.13■□□□□ 0.65
RXRB-202ENST00000374685 SMIM28A0A1B0GU29 152 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 ANKRD33BA6NCL7 494 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 FAM107AO95990 144 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 AGTP01019 485 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 ZNF865P0CJ78 1059 aaPredicted RBP19.12■□□□□ 0.65
RXRB-202ENST00000374685 RARBP10826 455 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 CTCFP49711 727 aaPredicted RBP19.12■□□□□ 0.65
RXRB-202ENST00000374685 SOX4Q06945 474 aaPredicted RBP19.12■□□□□ 0.65
RXRB-202ENST00000374685 INCA1Q0VD86 236 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 PDIA2Q13087 525 aaKnown RBP19.12■□□□□ 0.65
RXRB-202ENST00000374685 C9orf57Q5W0N0 161 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 TLDC1Q6P9B6 456 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 NETO2Q8NC67 525 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 FAM172AQ8WUF8 416 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 PAIP2Q9BPZ3 127 aaKnown RBP19.12■□□□□ 0.65
RXRB-202ENST00000374685 TNPO2O14787 897 aaKnown RBP19.12■□□□□ 0.65
RXRB-202ENST00000374685 RBP3P10745 1247 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 FGFR1P11362 822 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 VRTNQ9H8Y1 702 aa19.12■□□□□ 0.65
RXRB-202ENST00000374685 F5H423 210 aaPredicted RBP19.11■□□□□ 0.65
RXRB-202ENST00000374685 PGK1P00558 417 aa19.11■□□□□ 0.65
RXRB-202ENST00000374685 KYAT1Q16773 422 aa19.11■□□□□ 0.65
RXRB-202ENST00000374685 DARS2Q6PI48 645 aaKnown RBP19.11■□□□□ 0.65
RXRB-202ENST00000374685 RNF169Q8NCN4 708 aa19.11■□□□□ 0.65
RXRB-202ENST00000374685 ARRDC4Q8NCT1 418 aa19.11■□□□□ 0.65
RXRB-202ENST00000374685 DDX20Q9UHI6 824 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms