RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ASNSD1Q9NWL6 643 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 SLC45A1Q9Y2W3 748 aa16.74■□□□□ 0.27
CNKSR1-202ENST00000374253 A8MXQ7 604 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 SPAG7O75391 227 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 RBP3P10745 1247 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 IGFBP6P24592 240 aaPredicted RBP16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 SOWAHAQ2M3V2 549 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 CCDC14Q49A88 953 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 FNBP1LQ5T0N5 605 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 CROCCP2Q86T23 111 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 CACNA2D3Q8IZS8 1091 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 C2orf69Q8N8R5 385 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 ELAC2Q9BQ52 826 aaKnown RBP16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 SLC5A4Q9NY91 659 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 SPTLC1O15269 473 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 BASP1P80723 227 aaKnown RBP16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 MFSD10Q14728 455 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 EFTUD2Q15029 972 aaKnown RBP eCLIP16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 CA9Q16790 459 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 DCAF4L1Q3SXM0 396 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 NOTUMQ6P988 496 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 CMASQ8NFW8 434 aaPredicted RBP16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 CPT1BQ92523 772 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 CENPTQ96BT3 561 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 MAK16Q9BXY0 300 aaKnown RBP16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 RRAGCQ9HB90 399 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 HEY1Q9Y5J3 304 aa16.73■□□□□ 0.27
CNKSR1-202ENST00000374253 A0A087WUV0 522 aaPredicted RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 PRPSAP2O60256 369 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 FGFR1P11362 822 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 HOXD8P13378 290 aaPredicted RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 DARSP14868 501 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 IBSPP21815 317 aaPredicted RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 GCAP28676 217 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 SSTR1P30872 391 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 ZKSCAN8Q15776 578 aaPredicted RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 KYAT1Q16773 422 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 PPP6R3Q5H9R7 873 aaPredicted RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 C6orf89Q6UWU4 347 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 MICALCLQ6ZW33 695 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 FAM172AQ8WUF8 416 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 PAIP2Q9BPZ3 127 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 CNPY3Q9BT09 278 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 GGT7Q9UJ14 662 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 CAPN7Q9Y6W3 813 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 A6NJR5 290 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 SRRM3A6NNA2 597 aaPredicted RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 RASA4BC9J798 803 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 IGF2BP3O00425 579 aaKnown RBP eCLIP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 PAPSS1O43252 624 aaPredicted RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 RASA4O43374 803 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 TMEM63AO94886 807 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 F2P00734 622 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 LCP1P13796 627 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 SOX4Q06945 474 aaPredicted RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 KRT81Q14533 505 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 MORF4L2Q15014 288 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 C9orf57Q5W0N0 161 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 OLFML1Q6UWY5 402 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 PACS2Q86VP3 889 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 CCHCR1Q8TD31 782 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 NDRG1Q92597 394 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 OSBPL7Q9BZF2 842 aa16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 GNEQ9Y223 722 aaKnown RBP16.72■□□□□ 0.27
CNKSR1-202ENST00000374253 SCN4AP35499 1836 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 C5orf60A6NFR6 353 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 TCP11X1B4DZS4 312 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 CDH16O75309 829 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 DPYSL3Q14195 570 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 HIF1AQ16665 826 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 FBXW10Q5XX13 1052 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 DARS2Q6PI48 645 aaKnown RBP16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 BEST2Q8NFU1 509 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 NRCAMQ92823 1304 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 RRN3P2A6NIE6 340 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 MCF2LO15068 1137 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 GSCP56915 257 aaPredicted RBP16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 BBS9Q3SYG4 887 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 FAXCQ5TGI0 409 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 C4orf33Q8N1A6 199 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 KHSRPQ92945 711 aaKnown RBP eCLIP16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 CCDC77Q9BR77 488 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 WDR83Q9BRX9 315 aaKnown RBP16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 FGFR1OP2Q9NVK5 253 aa16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 FARP1Q9Y4F1 1045 aaPredicted RBP16.71■□□□□ 0.27
CNKSR1-202ENST00000374253 SMIM28A0A1B0GU29 152 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 GOLGA6L7A0A1B0GV03 622 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 APOC4-APOC2K7ER74 178 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 APOC2P02655 101 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 RABGGTBP53611 331 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 GPX6P59796 221 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 STAT4Q14765 748 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 SNX17Q15036 470 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 ZBTB6Q15916 424 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 TAZQ16635 292 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 CCDC121Q6ZUS5 278 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 CENPUQ71F23 418 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 NETO2Q8NC67 525 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 ARRDC4Q8NCT1 418 aa16.7■□□□□ 0.26
CNKSR1-202ENST00000374253 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms