RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SENP6Q9GZR1 1112 aaPredicted RBP14.84□□□□□ -0.03
TRAF1-201ENST00000373887 PSMD3O43242 534 aa14.83□□□□□ -0.03
TRAF1-201ENST00000373887 RHOBTB1O94844 696 aa14.83□□□□□ -0.03
TRAF1-201ENST00000373887 ERAP2Q6P179 960 aa14.83□□□□□ -0.03
TRAF1-201ENST00000373887 OTOAQ7RTW8 1153 aa14.83□□□□□ -0.03
TRAF1-201ENST00000373887 ZFPM1Q8IX07 1006 aa14.83□□□□□ -0.03
TRAF1-201ENST00000373887 SGF29Q96ES7 293 aa14.83□□□□□ -0.03
TRAF1-201ENST00000373887 TMEM8AQ9HCN3 771 aa14.83□□□□□ -0.03
TRAF1-201ENST00000373887 KLHL2O95198 593 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 AKAP5P24588 427 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 ZNF614Q8N883 585 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 ECSITQ9BQ95 431 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 NCF1BA6NI72 391 aaPredicted RBP14.83□□□□□ -0.04
TRAF1-201ENST00000373887 NCF1CA8MVU1 366 aaPredicted RBP14.83□□□□□ -0.04
TRAF1-201ENST00000373887 NDUFB5O43674 189 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 URODP06132 367 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 NCF1P14598 390 aaPredicted RBP14.83□□□□□ -0.04
TRAF1-201ENST00000373887 NUP62P37198 522 aaPredicted RBP14.83□□□□□ -0.04
TRAF1-201ENST00000373887 NUDT2P50583 147 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 DDR1Q08345 913 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 C3orf62Q6ZUJ4 267 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 CARD9Q9H257 536 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.83□□□□□ -0.04
TRAF1-201ENST00000373887 HPS5Q9UPZ3 1129 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 USP20Q9Y2K6 914 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 CEMIPQ8WUJ3 1361 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 FRMPD1Q5SYB0 1578 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 EVPLLA8MZ36 301 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 CKMP06732 381 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 TLK2Q86UE8 772 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 GPR63Q9BZJ6 419 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 TMX2Q9Y320 296 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 MST1RQ04912 1400 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 ZBTB22O15209 634 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 SPTLC1O15269 473 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 DARSP14868 501 aaKnown RBP14.83□□□□□ -0.04
TRAF1-201ENST00000373887 PRAMEF19Q5SWL8 479 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 MROH9Q5TGP6 573 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 RIN2Q8WYP3 895 aaPredicted RBP14.83□□□□□ -0.04
TRAF1-201ENST00000373887 NIF3L1Q9GZT8 377 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 XPNPEP3Q9NQH7 507 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 ANKEF1Q9NU02 776 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 KCND2Q9NZV8 630 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 ITIH6Q6UXX5 1313 aa14.83□□□□□ -0.04
TRAF1-201ENST00000373887 IGF2BP3O00425 579 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 CAPN1P07384 714 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 GHRP10912 638 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 CHI3L1P36222 383 aaPredicted RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 TRPM8Q7Z2W7 1104 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 FBXO32Q969P5 355 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 PNKPQ96T60 521 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 KRT84Q9NSB2 600 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 SLC39A10Q9ULF5 831 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 GPD1P21695 349 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 TARSP26639 723 aaKnown RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 POU4F1Q01851 419 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 BYSLQ13895 437 aaKnown RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 USP39Q53GS9 565 aaKnown RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 MOB2Q70IA6 237 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 TNIP2Q8NFZ5 429 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 MAGEB10Q96LZ2 347 aaPredicted RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 THUMPD3Q9BV44 507 aaKnown RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 WTIPA6NIX2 430 aaPredicted RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 M0QYT0 321 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 AGRPO00253 132 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 TRIM66O15016 1216 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 PARNO95453 639 aaKnown RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 SERPINB9P50453 376 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 ZNF484Q5JVG2 852 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 SYDE1Q6ZW31 735 aaPredicted RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 UXS1Q8NBZ7 420 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 IRX2Q9BZI1 471 aaPredicted RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 UBQLN1Q9UMX0 589 aaKnown RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 PXDNLA1KZ92 1463 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 PXDNQ92626 1479 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 STRNO43815 780 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 RHOBTB3O94955 611 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 FYNP06241 537 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 STILQ15468 1287 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 PRUNE1Q86TP1 453 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 MANSC1Q9H8J5 431 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 SNTG2Q9NY99 539 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 KIDINS220Q9ULH0 1771 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 MANSC4A6NHS7 340 aaPredicted RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 ALOX15P16050 662 aaPredicted RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 CYP2C19P33261 490 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 PRIM2P49643 509 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 GALNTL6Q49A17 601 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 AASDHQ4L235 1098 aaPredicted RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 PTF1AQ7RTS3 328 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 XPO6Q96QU8 1125 aaKnown RBP14.82□□□□□ -0.04
TRAF1-201ENST00000373887 GOLPH3Q9H4A6 298 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 PCDHAC2Q9Y5I4 1007 aa14.82□□□□□ -0.04
TRAF1-201ENST00000373887 FER1L4A9Z1Z3 1794 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 EIF3HO15372 352 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 SERPINB5P36952 375 aa14.81□□□□□ -0.04
TRAF1-201ENST00000373887 DDX39BQ13838 428 aaKnown RBP14.81□□□□□ -0.04
TRAF1-201ENST00000373887 OR8H2Q8N162 312 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms