RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 PMF1Q6P1K2 205 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 GJD3Q8N144 294 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 SPPL2BQ8TCT7 592 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 RFFLQ8WZ73 363 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 C18orf8Q96DM3 657 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 ARHGEF26Q96DR7 871 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 SMOQ99835 787 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 SLC4A5Q9BY07 1137 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 RHOBTB2Q9BYZ6 727 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 CSNK1G1Q9HCP0 422 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 AVENQ9NQS1 362 aaPredicted RBP21.76■■□□□ 1.07
SHISA4-201ENST00000362011 ST7Q9NRC1 585 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 FNIP2Q9P278 1114 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 MYO1AQ9UBC5 1043 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 GUCA1BQ9UMX6 200 aa21.76■■□□□ 1.07
SHISA4-201ENST00000362011 MTMR11A4FU01 709 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 H3BNC9 293 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 BEST1O76090 585 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 ABL1P00519 1130 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 CYP1A2P05177 515 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 IL9P15248 144 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 KCNA5P22460 613 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 OR1D2P34982 312 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 ACADSBP45954 432 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 GABRB2P47870 512 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 PTPN14Q15678 1187 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 PUS10Q3MIT2 529 aaKnown RBP21.75■■□□□ 1.07
SHISA4-201ENST00000362011 C2CD6Q53TS8 623 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 RNF19BQ6ZMZ0 732 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 TMC7Q7Z402 723 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 RHOT2Q8IXI1 618 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 SPPL3Q8TCT6 385 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 AUTS2Q8WXX7 1259 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 HSFY1Q96LI6 401 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 PGLYRP2Q96PD5 576 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 CLSTN3Q9BQT9 956 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 ABCB6Q9NP58 842 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 ALG13Q9NP73 1137 aaKnown RBP21.75■■□□□ 1.07
SHISA4-201ENST00000362011 DMAP1Q9NPF5 467 aaPredicted RBP21.75■■□□□ 1.07
SHISA4-201ENST00000362011 WDR35Q9P2L0 1181 aa21.75■■□□□ 1.07
SHISA4-201ENST00000362011 WDR27A2RRH5 827 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 FAM86C2PA6NEL3 165 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 PRR33A8MZF0 331 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 ADAM12O43184 909 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 ATMINO43313 823 aaPredicted RBP21.74■■□□□ 1.07
SHISA4-201ENST00000362011 ERBB2P04626 1255 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 RRM1P23921 792 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 CA8P35219 290 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 MAGEA11P43364 429 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 CACNA2D1P54289 1103 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 GSCP56915 257 aaPredicted RBP21.74■■□□□ 1.07
SHISA4-201ENST00000362011 CYP4A22Q5TCH4 519 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 VSTM1Q6UX27 236 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 PIGZQ86VD9 579 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 ZMIZ2Q8NF64 920 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 POF1BQ8WVV4 589 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 KCTD13Q8WZ19 329 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 UBXN6Q9BZV1 441 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 RXFP1Q9HBX9 757 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 ENTPD7Q9NQZ7 604 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 TJP2Q9UDY2 1190 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 DUSP10Q9Y6W6 482 aa21.74■■□□□ 1.07
SHISA4-201ENST00000362011 MACROD2A1Z1Q3 448 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 E5RJQ4 531 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 LILRB3O75022 631 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 CXCL14O95715 111 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 CYP2F1P24903 491 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 GRIK1P39086 918 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 RPL34P49207 117 aaKnown RBP21.73■■□□□ 1.07
SHISA4-201ENST00000362011 ZNF268Q14587 947 aaPredicted RBP21.73■■□□□ 1.07
SHISA4-201ENST00000362011 SMC1AQ14683 1233 aaKnown RBP21.73■■□□□ 1.07
SHISA4-201ENST00000362011 IFI16Q16666 785 aaKnown RBP21.73■■□□□ 1.07
SHISA4-201ENST00000362011 PTPROQ16827 1216 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 TPGS2Q68CL5 300 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 PTCRAQ6ISU1 281 aaPredicted RBP21.73■■□□□ 1.07
SHISA4-201ENST00000362011 TMEM110Q86TL2 294 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 XYLT1Q86Y38 959 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 TCF25Q9BQ70 676 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 PNPLA8Q9NP80 782 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 TLR9Q9NR96 1032 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 TMEM30AQ9NV96 361 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 CTTNBP2NLQ9P2B4 639 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 UVRAGQ9P2Y5 699 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 SCINQ9Y6U3 715 aa21.73■■□□□ 1.07
SHISA4-201ENST00000362011 DENND4CQ5VZ89 1909 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 TRIM66O15016 1216 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 ZNF500O60304 480 aaPredicted RBP21.72■■□□□ 1.07
SHISA4-201ENST00000362011 NOP2P46087 812 aaKnown RBP21.72■■□□□ 1.07
SHISA4-201ENST00000362011 NDUFV1P49821 464 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 NAP1L1P55209 391 aaKnown RBP21.72■■□□□ 1.07
SHISA4-201ENST00000362011 RAB33AQ14088 237 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 TCEAL1Q15170 157 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 OR6B2Q6IFH4 312 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 PLEKHA7Q6IQ23 1121 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 DNAJC24Q6P3W2 148 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 PHLDB2Q86SQ0 1253 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 SCN4BQ8IWT1 228 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 RNF10Q8N5U6 811 aaKnown RBP21.72■■□□□ 1.07
SHISA4-201ENST00000362011 ATAD1Q8NBU5 361 aa21.72■■□□□ 1.07
SHISA4-201ENST00000362011 SLC35G2Q8TBE7 412 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms