RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 C15orf52Q6ZUT6 534 aaKnown RBP19.27■□□□□ 0.68
CLIP2-202ENST00000361545 SPIRE2Q8WWL2 714 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 SCUBE2Q9NQ36 999 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 ARHGEF28Q8N1W1 1705 aaKnown RBP19.27■□□□□ 0.68
CLIP2-202ENST00000361545 FAM95CA0A1B0GW59 222 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 ZSCAN9O15535 394 aaPredicted RBP19.27■□□□□ 0.68
CLIP2-202ENST00000361545 ENO1P06733 434 aaKnown RBP19.27■□□□□ 0.68
CLIP2-202ENST00000361545 FDFT1P37268 417 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 INHBEP58166 350 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 E2F4Q16254 413 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 SPATA21Q7Z572 469 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 KAT2BQ92831 832 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 FOXP3Q9BZS1 431 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 XAB2Q9HCS7 855 aaKnown RBP19.27■□□□□ 0.68
CLIP2-202ENST00000361545 SCOCQ9UIL1 159 aa19.27■□□□□ 0.68
CLIP2-202ENST00000361545 SMAPO00193 183 aa19.27■□□□□ 0.67
CLIP2-202ENST00000361545 LMNAP02545 664 aaKnown RBP19.27■□□□□ 0.67
CLIP2-202ENST00000361545 RHOAP61586 193 aa19.27■□□□□ 0.67
CLIP2-202ENST00000361545 ZNF410Q86VK4 478 aa19.27■□□□□ 0.67
CLIP2-202ENST00000361545 NUP93Q8N1F7 819 aa19.27■□□□□ 0.67
CLIP2-202ENST00000361545 FAM136AQ96C01 138 aa19.27■□□□□ 0.67
CLIP2-202ENST00000361545 TEX12Q9BXU0 123 aa19.27■□□□□ 0.67
CLIP2-202ENST00000361545 TLR8Q9NR97 1041 aaKnown RBP19.27■□□□□ 0.67
CLIP2-202ENST00000361545 CKBP12277 381 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 ADIGQ0VDE8 80 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 TRIM48Q8IWZ4 208 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 RIN2Q8WYP3 895 aaPredicted RBP19.26■□□□□ 0.67
CLIP2-202ENST00000361545 BAZ2BQ9UIF8 2168 aaKnown RBP19.26■□□□□ 0.67
CLIP2-202ENST00000361545 JCHAINP01591 159 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 AMHP03971 560 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 MAPTP10636 758 aaKnown RBP19.26■□□□□ 0.67
CLIP2-202ENST00000361545 GZMAP12544 262 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 SOX11P35716 441 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 PDCD2Q16342 344 aaPredicted RBP19.26■□□□□ 0.67
CLIP2-202ENST00000361545 TTC39BQ5VTQ0 682 aaPredicted RBP19.26■□□□□ 0.67
CLIP2-202ENST00000361545 RGMBQ6NW40 437 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 GRAMD1AQ96CP6 724 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 GAD1Q99259 594 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 PKD2L2Q9NZM6 624 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 SP3Q02447 781 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 MTFR1Q15390 333 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 C11orf96Q7Z7L8 435 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 MRIQ9BWK5 157 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 NMRK2Q9NPI5 230 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 CAPN6Q9Y6Q1 641 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 DDX5P17844 614 aaKnown RBP19.26■□□□□ 0.67
CLIP2-202ENST00000361545 HNRNPH2P55795 449 aaKnown RBP19.26■□□□□ 0.67
CLIP2-202ENST00000361545 LRRC74AQ0VAA2 488 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 TERF2Q15554 542 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 TMEM119Q4V9L6 283 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 ITIH5Q86UX2 942 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 MKL1Q969V6 931 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 KCTD10Q9H3F6 313 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 MRPL42Q9Y6G3 142 aaKnown RBP19.26■□□□□ 0.67
CLIP2-202ENST00000361545 SETSIPP0DME0 302 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 MYBPC2Q14324 1141 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 CELF3Q5SZQ8 465 aaKnown RBP19.26■□□□□ 0.67
CLIP2-202ENST00000361545 VSIG10LQ86VR7 867 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 ASB7Q9H672 318 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 AURKCQ9UQB9 309 aa19.26■□□□□ 0.67
CLIP2-202ENST00000361545 HNRNPCL2B2RXH8 293 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 HNRNPCL1O60812 293 aaKnown RBP19.25■□□□□ 0.67
CLIP2-202ENST00000361545 LSM8O95777 96 aaKnown RBP19.25■□□□□ 0.67
CLIP2-202ENST00000361545 MZF1P28698 734 aaPredicted RBP19.25■□□□□ 0.67
CLIP2-202ENST00000361545 SLC29A2Q14542 456 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 ABRAQ8N0Z2 381 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 FRMPD4Q14CM0 1322 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 PTPN7P35236 360 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 CLEC16AQ2KHT3 1053 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 TEDDM1Q5T9Z0 273 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 KCNK18Q7Z418 384 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 USP13Q92995 863 aaPredicted RBP19.25■□□□□ 0.67
CLIP2-202ENST00000361545 MTBPQ96DY7 904 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 TISP43B9A030 160 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 RNASEH1O60930 286 aaKnown RBP19.25■□□□□ 0.67
CLIP2-202ENST00000361545 SRP72O76094 671 aaKnown RBP19.25■□□□□ 0.67
CLIP2-202ENST00000361545 TIGD7Q6NT04 549 aaPredicted RBP19.25■□□□□ 0.67
CLIP2-202ENST00000361545 ZPBP2Q6X784 338 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 ARHGEF19Q8IW93 802 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 ZNF606Q8WXB4 792 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 NRBF2Q96F24 287 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 ATXN3LQ9H3M9 355 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 IGFLR1Q9H665 355 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 AAR2Q9Y312 384 aaKnown RBP19.25■□□□□ 0.67
CLIP2-202ENST00000361545 TSPAN3O60637 253 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 CHADLQ6NUI6 762 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 TMA16Q96EY4 203 aaKnown RBP19.25■□□□□ 0.67
CLIP2-202ENST00000361545 CELF6Q96J87 481 aaKnown RBP19.25■□□□□ 0.67
CLIP2-202ENST00000361545 ISCUQ9H1K1 167 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 NT5MQ9NPB1 228 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 SPATS2LQ9NUQ6 558 aaKnown RBP19.25■□□□□ 0.67
CLIP2-202ENST00000361545 UBP1Q9NZI7 540 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 PLA2G4CQ9UP65 541 aa19.25■□□□□ 0.67
CLIP2-202ENST00000361545 FNTAP49354 379 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 TFAP2DQ7Z6R9 452 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 HERC6Q8IVU3 1022 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 NDE1Q9NXR1 346 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 TRMT6Q9UJA5 497 aaKnown RBP19.24■□□□□ 0.67
CLIP2-202ENST00000361545 SNCAIPQ9Y6H5 919 aa19.24■□□□□ 0.67
CLIP2-202ENST00000361545 TRIM49D1C9J1S8 452 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms