RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 VN1R5Q7Z5H4 357 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 SLITRK1Q96PX8 696 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 CNPY3Q9BT09 278 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 PI4K2AQ9BTU6 479 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 TAGLN3Q9UI15 199 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 KLHL18O94889 574 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 GYPCP04921 128 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 POU1F1P28069 291 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 ZNF177Q13360 481 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 CAMK2GQ13555 558 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 RSBN1Q5VWQ0 802 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 SLC44A2Q8IWA5 706 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 MYO1HQ8N1T3 1032 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 DPP10Q8N608 796 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 C1orf131Q8NDD1 294 aaKnown RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 FBXO36Q8NEA4 188 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 TPCN2Q8NHX9 752 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 EPS8L3Q8TE67 593 aaKnown RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 ZMYND8Q9ULU4 1186 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 TIMM44O43615 452 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 CPSF4O95639 269 aaKnown RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 EPHB2P29323 1055 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 NME5P56597 212 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 ATP6AP1LQ52LC2 224 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 FAM45BPQ6NSW5 357 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 EFCAB12Q6NXP0 572 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 CYP4Z2PQ8N1L4 340 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 CASP10Q92851 521 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 WDCPQ9H6R7 721 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 KDM6AO15550 1401 aaPredicted RBP15.39■□□□□ 0.05
LMX1B-201ENST00000355497 RPS6KL1Q9Y6S9 549 aa15.39■□□□□ 0.05
LMX1B-201ENST00000355497 ZNF682O95780 498 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 FCGR1AP12314 374 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 TAF6P49848 677 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 SEL1L3Q68CR1 1132 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 STOX1Q6ZVD7 989 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 PNKPQ96T60 521 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 SERHL2Q9H4I8 314 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 SERHLQ9NQF3 203 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 NR5A2O00482 541 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 SMNDC1O75940 238 aaKnown RBP eCLIP15.38■□□□□ 0.05
LMX1B-201ENST00000355497 KLRC1P26715 233 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 PLEKHA7Q6IQ23 1121 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 BNIPLQ7Z465 357 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 RTL3Q8N8U3 475 aaKnown RBP15.38■□□□□ 0.05
LMX1B-201ENST00000355497 SCUBE2Q9NQ36 999 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 INTS13Q9NVM9 706 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 DYRK1BQ9Y463 629 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 C19orf81C9J6K1 198 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 NR3C2P08235 984 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 ODC1P11926 461 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 CALB2P22676 271 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 SLC11A2P49281 568 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 EPC2Q52LR7 807 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 LRRC71Q8N4P6 559 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 RGS18Q9NS28 235 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 IARS2Q9NSE4 1012 aaKnown RBP15.38■□□□□ 0.05
LMX1B-201ENST00000355497 TUBE1Q9UJT0 475 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 C6orf222P0C671 652 aaPredicted RBP15.38■□□□□ 0.05
LMX1B-201ENST00000355497 C1DQ13901 141 aaKnown RBP15.38■□□□□ 0.05
LMX1B-201ENST00000355497 POLD3Q15054 466 aaPredicted RBP15.38■□□□□ 0.05
LMX1B-201ENST00000355497 FAXCQ5TGI0 409 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 NOTUMQ6P988 496 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 RDM1Q8NG50 284 aa15.38■□□□□ 0.05
LMX1B-201ENST00000355497 NSUN4Q96CB9 384 aaKnown RBP15.38■□□□□ 0.05
LMX1B-201ENST00000355497 STN1Q9H668 368 aaKnown RBP15.38■□□□□ 0.05
LMX1B-201ENST00000355497 ROBO2Q9HCK4 1378 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 M0QYT0 321 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 DYRK3O43781 588 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 FEN1P39748 380 aaKnown RBP15.37■□□□□ 0.05
LMX1B-201ENST00000355497 FOXO4P98177 505 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 TIGD7Q6NT04 549 aaPredicted RBP15.37■□□□□ 0.05
LMX1B-201ENST00000355497 GJB7Q6PEY0 223 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 VPS33AQ96AX1 596 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 OMA1Q96E52 524 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 MXRA8Q9BRK3 442 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 THAP2Q9H0W7 228 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 PABPC3Q9H361 631 aaKnown RBP15.37■□□□□ 0.05
LMX1B-201ENST00000355497 AVENQ9NQS1 362 aaPredicted RBP15.37■□□□□ 0.05
LMX1B-201ENST00000355497 KLHL3Q9UH77 587 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 FLT1P17948 1338 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 SDR42E2A6NKP2 422 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 FAM47E-STBD1D6RA91 191 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 GSTM1P09488 218 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 NFIL3Q16649 462 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 C11orf88Q6PI97 169 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 KCTD17Q8N5Z5 321 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 ZNF614Q8N883 585 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 NOA1Q8NC60 698 aaKnown RBP15.37■□□□□ 0.05
LMX1B-201ENST00000355497 KCTD14Q9BQ13 255 aaPredicted RBP15.37■□□□□ 0.05
LMX1B-201ENST00000355497 HDHD2Q9H0R4 259 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 PCDHB7Q9Y5E2 793 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 ZCCHC18P0CG32 403 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 PURAQ00577 322 aaKnown RBP15.37■□□□□ 0.05
LMX1B-201ENST00000355497 MAPK7Q13164 816 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 CUL2Q13617 745 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 FAM45AQ8TCE6 357 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 FANCEQ9HB96 536 aa15.37■□□□□ 0.05
LMX1B-201ENST00000355497 SPATA31E1Q6ZUB1 1445 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms