RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CILPO75339 1184 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 EPB41P11171 864 aaKnown RBP17.07■□□□□ 0.32
RAB5C-201ENST00000346213 FKBP3Q00688 224 aaKnown RBP17.07■□□□□ 0.32
RAB5C-201ENST00000346213 LRRC63Q05C16 580 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 KRT39Q6A163 491 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 TMC6Q7Z403 805 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 LRRC8AQ8IWT6 810 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 MAML2Q8IZL2 1156 aaPredicted RBP17.07■□□□□ 0.32
RAB5C-201ENST00000346213 CRYBG2Q8N1P7 616 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 SLC2A14Q8TDB8 520 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 KAT5Q92993 513 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 DHTKD1Q96HY7 919 aaPredicted RBP17.07■□□□□ 0.32
RAB5C-201ENST00000346213 C8orf48Q96LL4 319 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 NIF3L1Q9GZT8 377 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 BRD9Q9H8M2 597 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 LTB4R2Q9NPC1 389 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 HPS4Q9NQG7 708 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 GTSE1Q9NYZ3 720 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 CACNA1HO95180 2353 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 FRYLO94915 3013 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 ANAPC1Q9H1A4 1944 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 HHLA1C9JL84 531 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 PSMA7O14818 248 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 CLSTN1O94985 981 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 WEE1P30291 646 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 TPD52L1Q16890 204 aaPredicted RBP17.06■□□□□ 0.32
RAB5C-201ENST00000346213 FILIP1Q7Z7B0 1213 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 MON1AQ86VX9 555 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 VSTM4Q8IW00 320 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 UBR7Q8N806 425 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 ARL14EPQ8N8R7 260 aaPredicted RBP17.06■□□□□ 0.32
RAB5C-201ENST00000346213 TAF4BQ92750 862 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 RNF38Q9H0F5 515 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 KRT82Q9NSB4 513 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 RAB20Q9NX57 234 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 COQ4Q9Y3A0 265 aa17.06■□□□□ 0.32
RAB5C-201ENST00000346213 KANSL1LA0AUZ9 987 aa17.05■□□□□ 0.32
RAB5C-201ENST00000346213 CALCAP01258 141 aa17.05■□□□□ 0.32
RAB5C-201ENST00000346213 GTF2H1P32780 548 aa17.05■□□□□ 0.32
RAB5C-201ENST00000346213 IFRD2Q12894 506 aaPredicted RBP17.05■□□□□ 0.32
RAB5C-201ENST00000346213 TCERG1LQ5VWI1 586 aa17.05■□□□□ 0.32
RAB5C-201ENST00000346213 DENND5BQ6ZUT9 1274 aa17.05■□□□□ 0.32
RAB5C-201ENST00000346213 DTWD2Q8NBA8 298 aa17.05■□□□□ 0.32
RAB5C-201ENST00000346213 LMO3Q8TAP4 145 aa17.05■□□□□ 0.32
RAB5C-201ENST00000346213 KIAA1524Q8TCG1 905 aa17.05■□□□□ 0.32
RAB5C-201ENST00000346213 DEPDC1BQ8WUY9 529 aa17.05■□□□□ 0.32
RAB5C-201ENST00000346213 WBP2Q969T9 261 aa17.05■□□□□ 0.32
RAB5C-201ENST00000346213 TRPC7Q9HCX4 862 aa17.05■□□□□ 0.32
RAB5C-201ENST00000346213 A0A1B0GTH6 734 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 SCAMP3O14828 347 aaKnown RBP17.04■□□□□ 0.32
RAB5C-201ENST00000346213 FGF19O95750 216 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 ARSAP15289 507 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 ADORA2BP29275 332 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 NR1I3Q14994 352 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 MAPRE1Q15691 268 aaKnown RBP17.04■□□□□ 0.32
RAB5C-201ENST00000346213 ZNF77Q15935 545 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 TAF12Q16514 161 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 ZNF394Q53GI3 561 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 ARHGAP15Q53QZ3 475 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 HSP90AA4PQ58FG1 418 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 APTXQ7Z2E3 356 aaKnown RBP17.04■□□□□ 0.32
RAB5C-201ENST00000346213 IRF2BP1Q8IU81 584 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 FBXL13Q8NEE6 735 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 DNASE1L2Q92874 299 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 TSG101Q99816 390 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 GPR88Q9GZN0 384 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 PYCARDQ9ULZ3 195 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 PIAS3Q9Y6X2 628 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 ZNF840PA6NDX5 716 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 ANTXRLA6NF34 631 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 STK25O00506 426 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 SLC5A3P53794 718 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 PRKCQQ04759 706 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 LRMPQ12912 555 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 TAF10Q12962 218 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 USP4Q13107 963 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 GAS6Q14393 721 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 UBXN2BQ14CS0 331 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 SLC4A11Q8NBS3 891 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 CCDC150Q8NCX0 1101 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 BPIFB1Q8TDL5 484 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 FAM83CQ9BQN1 747 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 CSNK1G1Q9HCP0 422 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 C2orf42Q9NWW7 574 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 IL37Q9NZH6 218 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 ARMCX3Q9UH62 379 aaPredicted RBP17.04■□□□□ 0.32
RAB5C-201ENST00000346213 LIMA1Q9UHB6 759 aaKnown RBP17.04■□□□□ 0.32
RAB5C-201ENST00000346213 SIT1Q9Y3P8 196 aa17.04■□□□□ 0.32
RAB5C-201ENST00000346213 PATJQ8NI35 1801 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 WDR87Q6ZQQ6 2873 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 LRRC10BA6NIK2 292 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 ZNF263O14978 683 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 TRIM66O15016 1216 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 CHADO15335 359 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 AP1G2O75843 785 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 OLFM2O95897 454 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 FMO5P49326 533 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 RAD23BP54727 409 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 MAP3K7CLP57077 242 aa17.03■□□□□ 0.32
RAB5C-201ENST00000346213 PPP1R26Q5T8A7 1209 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms