RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 SMARCAL1Q9NZC9 954 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 VPS28Q9UK41 221 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 MED14O60244 1454 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 NCF1BA6NI72 391 aaPredicted RBP15.76■□□□□ 0.11
COL11A2-201ENST00000341947 NCF1CA8MVU1 366 aaPredicted RBP15.76■□□□□ 0.11
COL11A2-201ENST00000341947 SUPT7LO94864 414 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 NCF1P14598 390 aaPredicted RBP15.76■□□□□ 0.11
COL11A2-201ENST00000341947 CAP2P40123 477 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 PWP1Q13610 501 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 FUT11Q495W5 492 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 TUBGCP3Q96CW5 907 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 DMAP1Q9NPF5 467 aaPredicted RBP15.76■□□□□ 0.11
COL11A2-201ENST00000341947 RUVBL2Q9Y230 463 aaKnown RBP15.76■□□□□ 0.11
COL11A2-201ENST00000341947 LZTS1Q9Y250 596 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 LRRC7Q96NW7 1537 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 ALBP02768 609 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 RRM2P31350 389 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 BCAT1P54687 386 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 ORC1Q13415 861 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 ICE2Q659A1 982 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 CCDC60Q8IWA6 550 aaPredicted RBP15.76■□□□□ 0.11
COL11A2-201ENST00000341947 NSL1Q96IY1 281 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 CAMKK2Q96RR4 588 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 NFKBIZQ9BYH8 718 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 CLPBQ9H078 707 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 DPP7Q9UHL4 492 aa15.76■□□□□ 0.11
COL11A2-201ENST00000341947 EIF3HO15372 352 aaKnown RBP eCLIP15.75■□□□□ 0.11
COL11A2-201ENST00000341947 KCNJ1P48048 391 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 RHOAP61586 193 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 STX5Q13190 355 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 PLCL1Q15111 1095 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 BARGINQ6ZT62 677 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 MMGT1Q8N4V1 131 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 SEC16BQ96JE7 1060 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 LNPEPQ9UIQ6 1025 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 RPS6KL1Q9Y6S9 549 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 RNF103O00237 685 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 CRTAMO95727 393 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 FNTAP49354 379 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 OTOAQ7RTW8 1153 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 CKBP12277 381 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 LHX1P48742 406 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 ANTXR2P58335 489 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 CYP51A1Q16850 503 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 FAXCQ5TGI0 409 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 FAM9CQ8IZT9 166 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 CENPLQ8N0S6 344 aaPredicted RBP15.75■□□□□ 0.11
COL11A2-201ENST00000341947 USP1O94782 785 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 PSMA4P25789 261 aaKnown RBP15.75■□□□□ 0.11
COL11A2-201ENST00000341947 EFEMP1Q12805 493 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 ZNF280DQ6N043 979 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 TRPM8Q7Z2W7 1104 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 SLC16A10Q8TF71 515 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 CPB2Q96IY4 423 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 SLC24A3Q9HC58 644 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 TUBGCP4Q9UGJ1 667 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 ZNF711Q9Y462 761 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 NDUFB5O43674 189 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 HPGDP15428 266 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 CLCN3P51790 818 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 TGM3Q08188 693 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 GALNTL6Q49A17 601 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 ITIH5Q86UX2 942 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 ZNF614Q8N883 585 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 THAP2Q9H0W7 228 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 PDGFCQ9NRA1 345 aa15.75■□□□□ 0.11
COL11A2-201ENST00000341947 VTNP04004 478 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 KPNA1P52294 538 aaPredicted RBP15.74■□□□□ 0.11
COL11A2-201ENST00000341947 COPAP53621 1224 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 AMPD2Q01433 879 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 ERO1BQ86YB8 467 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 SLC13A5Q86YT5 568 aaPredicted RBP15.74■□□□□ 0.11
COL11A2-201ENST00000341947 CGRRF1Q99675 332 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 ZSWIM1Q9BR11 485 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 ADARB2Q9NS39 739 aaKnown RBP15.74■□□□□ 0.11
COL11A2-201ENST00000341947 SLC12A8A0AV02 714 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 THP07101 528 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 CYP4Z1Q86W10 505 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 DDX42Q86XP3 938 aaKnown RBP eCLIP15.74■□□□□ 0.11
COL11A2-201ENST00000341947 NT5DC4Q86YG4 428 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 CHORDC1Q9UHD1 332 aaPredicted RBP15.74■□□□□ 0.11
COL11A2-201ENST00000341947 DRG1Q9Y295 367 aaKnown RBP15.74■□□□□ 0.11
COL11A2-201ENST00000341947 PCDHB12Q9Y5F1 795 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 TIMM44O43615 452 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 PYGMP11217 842 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 KCNA3P22001 575 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 NUDT2P50583 147 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 CCZ1BP86790 482 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 CCZ1P86791 482 aaPredicted RBP15.74■□□□□ 0.11
COL11A2-201ENST00000341947 FBXO16Q8IX29 292 aaPredicted RBP15.74■□□□□ 0.11
COL11A2-201ENST00000341947 ANKS1AQ92625 1134 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 ZDHHC9Q9Y397 364 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 TRPM1Q7Z4N2 1603 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 LOC100653049A0A140TA62 436 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 KRT34O76011 436 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 PDIA6Q15084 440 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 PGS1Q32NB8 556 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 CCDC81Q6ZN84 652 aa15.74■□□□□ 0.11
COL11A2-201ENST00000341947 CDK5RAP1Q96SZ6 601 aaKnown RBP15.74■□□□□ 0.11
COL11A2-201ENST00000341947 KRT84Q9NSB2 600 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms