RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SATB2Q9UPW6 733 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 SLC27A5Q9Y2P5 690 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 RNF11Q9Y3C5 154 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 ANKRD62A6NC57 917 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 ACSL4O60488 711 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 PCCAP05165 728 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 FGFR3P22607 806 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 TRAF2Q12933 501 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 SPDYAQ5MJ70 313 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 DGKHQ86XP1 1220 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 ALLCQ8N6M5 410 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 SLC4A11Q8NBS3 891 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF280CQ8ND82 737 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 ZSWIM2Q8NEG5 633 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 TCP10LQ8TDR4 215 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 TRPC4APQ8TEL6 797 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 SEZ6LQ9BYH1 1024 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 NUF2Q9BZD4 464 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 TYW1Q9NV66 732 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 IGSF1Q8N6C5 1336 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 PLOD2O00469 737 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 SNPHO15079 494 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 KCNJ13O60928 360 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 BMP15O95972 392 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 INHBBP09529 407 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 MSL3P1P0C860 447 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 ALAS1P13196 640 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 EIF2AK2P19525 551 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 RRM1P23921 792 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 LONP1P36776 959 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 GRIA3P42263 894 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 LIFRP42702 1097 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 TUBA4AP68366 448 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 MRPS22P82650 360 aaKnown RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 CACNB1Q02641 598 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 OGFRL1Q5TC84 451 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 PXDC1Q5TGL8 231 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 OTOP3Q7RTS5 596 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 C4orf32Q8N8J7 132 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 GPKOWQ92917 476 aaPredicted RBP eCLIP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 EFHD2Q96C19 240 aaPredicted RBP10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 TTC25Q96NG3 672 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 CHST7Q9NS84 486 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 GIMAP4Q9NUV9 329 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 PCYOX1Q9UHG3 505 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 BOLA1Q9Y3E2 137 aa10.04□□□□□ -0.8
PTCHD4-201ENST00000339488 PIK3C2AO00443 1686 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 BTNL10A8MVZ5 291 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 CAPN14A8MX76 684 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 PIK3R2O00459 728 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 CLDN3O15551 220 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 HOXC11O43248 304 aaPredicted RBP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 RSL1D1O76021 490 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 BMP10O95393 424 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 PROCP04070 461 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 PTPN1P18031 435 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 EIF2B5Q13144 721 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 SNAP47Q5SQN1 464 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 LLGL2Q6P1M3 1020 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF398Q8TD17 642 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 PDCD6IPQ8WUM4 868 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 VPS35Q96QK1 796 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 TRIM56Q9BRZ2 755 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 TUBB6Q9BUF5 446 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 MECRQ9BV79 373 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 Q9H521 79 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 PLK2Q9NYY3 685 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 CRNNQ9UBG3 495 aaPredicted RBP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 TAGLN3Q9UI15 199 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 NIP7Q9Y221 180 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 UGT2A1Q9Y4X1 527 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 SF3B1O75533 1304 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 LRRC37A3O60309 1634 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 POTECB2RU33 542 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 H3BMQ9 156 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 TYROBPO43914 113 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 CAPN1P07384 714 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 RGPD1P0DJD0 1748 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 PTPN5P54829 565 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 P2RX3P56373 397 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 COPZ1P61923 177 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 MESDQ14696 234 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 INAVAQ3KP66 663 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 KIF6Q6ZMV9 814 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 RNF207Q6ZRF8 634 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 COPS6Q7L5N1 327 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 GPR141Q7Z602 305 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 PTAR1Q7Z6K3 402 aaPredicted RBP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 ZC3H7AQ8IWR0 971 aaKnown RBP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 ATP6V0D2Q8N8Y2 350 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 TTC13Q8NBP0 860 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 GALNT6Q8NCL4 622 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 SYN2Q92777 582 aaPredicted RBP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 ZNF486Q96H40 463 aaPredicted RBP10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 COG8Q96MW5 612 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 RILPQ96NA2 401 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 CITED4Q96RK1 184 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 VPS37BQ9H9H4 285 aa10.03□□□□□ -0.8
PTCHD4-201ENST00000339488 C17orf75Q9HAS0 396 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms