RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 SRRM1Q8IYB3 904 aaKnown RBP24.21■■□□□ 1.47
CLPTM1-201ENST00000337392 GPD1P21695 349 aa24.21■■□□□ 1.47
CLPTM1-201ENST00000337392 CTCFP49711 727 aaPredicted RBP24.21■■□□□ 1.47
CLPTM1-201ENST00000337392 PPP6R3Q5H9R7 873 aaPredicted RBP24.21■■□□□ 1.47
CLPTM1-201ENST00000337392 KBTBD7Q8WVZ9 684 aa24.21■■□□□ 1.47
CLPTM1-201ENST00000337392 HEY1Q9Y5J3 304 aa24.21■■□□□ 1.47
CLPTM1-201ENST00000337392 BPTFQ12830 3046 aa24.21■■□□□ 1.47
CLPTM1-201ENST00000337392 CLDN5O00501 218 aa24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 KRT7P08729 469 aa24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 ZNF143P52747 638 aaPredicted RBP24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 FNBP1LQ5T0N5 605 aa24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 ERMARDQ5T6L9 678 aa24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 RNASEH2BQ5TBB1 312 aaKnown RBP24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 POLNQ7Z5Q5 900 aa24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 SPATA18Q8TC71 538 aa24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 WNT8BQ93098 351 aa24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 ARHGAP39Q9C0H5 1083 aa24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 INTS9Q9NV88 658 aaKnown RBP24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 TPX2Q9ULW0 747 aaKnown RBP24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 NAALADL1Q9UQQ1 740 aa24.2■■□□□ 1.47
CLPTM1-201ENST00000337392 TMEM120BA0PK00 339 aa24.2■■□□□ 1.46
CLPTM1-201ENST00000337392 AGTP01019 485 aa24.2■■□□□ 1.46
CLPTM1-201ENST00000337392 TMED2Q15363 201 aa24.2■■□□□ 1.46
CLPTM1-201ENST00000337392 FAXCQ5TGI0 409 aa24.2■■□□□ 1.46
CLPTM1-201ENST00000337392 OLFML1Q6UWY5 402 aa24.2■■□□□ 1.46
CLPTM1-201ENST00000337392 CTU1Q7Z7A3 348 aaKnown RBP24.2■■□□□ 1.46
CLPTM1-201ENST00000337392 ZCCHC9Q8N567 271 aaKnown RBP24.2■■□□□ 1.46
CLPTM1-201ENST00000337392 FAM172AQ8WUF8 416 aa24.2■■□□□ 1.46
CLPTM1-201ENST00000337392 WDR83Q9BRX9 315 aaKnown RBP24.2■■□□□ 1.46
CLPTM1-201ENST00000337392 RASSF4Q9H2L5 321 aa24.2■■□□□ 1.46
CLPTM1-201ENST00000337392 TMPRSS4Q9NRS4 437 aa24.2■■□□□ 1.46
CLPTM1-201ENST00000337392 MBLAC1A4D2B0 266 aaPredicted RBP24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 RPL22P35268 128 aaKnown RBP24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 PDIA2Q13087 525 aaKnown RBP24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 DCAF4L1Q3SXM0 396 aa24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 UBXN11Q5T124 520 aa24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 VSTM1Q6UX27 236 aa24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 F5H423 210 aaPredicted RBP24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 TMEM63AO94886 807 aa24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 PGK1P00558 417 aa24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 RBP3P10745 1247 aa24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 TNFAIP8L3Q5GJ75 292 aa24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 FNIP1Q8TF40 1166 aa24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 VPS37BQ9H9H4 285 aa24.19■■□□□ 1.46
CLPTM1-201ENST00000337392 SYNJ2BP-COX16A0A087WUM0 186 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 RRN3P2A6NIE6 340 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 C6orf222P0C671 652 aaPredicted RBP24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 GCAP28676 217 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 TKTP29401 623 aaKnown RBP24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 SSTR1P30872 391 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 EIF3EP60228 445 aaKnown RBP24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 ADAM17P78536 824 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 RNF187Q5TA31 235 aaPredicted RBP24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 ALKAL1Q6UXT8 129 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 BBS12Q6ZW61 710 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 LRRC34Q8IZ02 419 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 CMASQ8NFW8 434 aaPredicted RBP24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 CPT1BQ92523 772 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 NKD2Q969F2 451 aaPredicted RBP24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 COX16Q9P0S2 106 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 TIMM13Q9Y5L4 95 aaPredicted RBP24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 AVILO75366 819 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 COPS2P61201 443 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 BASP1P80723 227 aaKnown RBP24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 DPYSL3Q14195 570 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 PKDCCQ504Y2 493 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 CPLX4Q7Z7G2 160 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 BEST2Q8NFU1 509 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 SLC2A14Q8TDB8 520 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 SLC35F5Q8WV83 523 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 RSAD2Q8WXG1 361 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 PRCCQ92733 491 aaPredicted RBP24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 LPPQ93052 612 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 FAM129AQ9BZQ8 928 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 WDR35Q9P2L0 1181 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 GGT7Q9UJ14 662 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 MFHAS1Q9Y4C4 1052 aa24.18■■□□□ 1.46
CLPTM1-201ENST00000337392 SMIM35A0A1B0GVV1 85 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 SPAG7O75391 227 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 ITGAVP06756 1048 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 CORO7P57737 925 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 PITX1P78337 314 aaPredicted RBP24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 FBXO47Q5MNV8 452 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 TWF2Q6IBS0 349 aaKnown RBP24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 CXCL17Q6UXB2 119 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 SMG8Q8ND04 991 aaKnown RBP24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 ASNSD1Q9NWL6 643 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 IPPQ9Y573 584 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 BEST1O76090 585 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 DRD4P21917 467 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 IL4RP24394 825 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 RASAL3Q86YV0 1011 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 CNPY3Q9BT09 278 aa24.17■■□□□ 1.46
CLPTM1-201ENST00000337392 PRPSAP2O60256 369 aa24.16■■□□□ 1.46
CLPTM1-201ENST00000337392 RARBP10826 455 aa24.16■■□□□ 1.46
CLPTM1-201ENST00000337392 TRIM32Q13049 653 aa24.16■■□□□ 1.46
CLPTM1-201ENST00000337392 TRPV1Q8NER1 839 aa24.16■■□□□ 1.46
CLPTM1-201ENST00000337392 KPNA7A9QM74 516 aa24.16■■□□□ 1.46
CLPTM1-201ENST00000337392 GTF2A1P52655 376 aaPredicted RBP24.16■■□□□ 1.46
CLPTM1-201ENST00000337392 DRICH1Q6PGQ1 229 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms