RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 BCAT1P54687 386 aa17.31■□□□□ 0.36
C11orf88-201ENST00000332814 GPC5P78333 572 aa17.31■□□□□ 0.36
C11orf88-201ENST00000332814 VITQ6UXI7 678 aa17.31■□□□□ 0.36
C11orf88-201ENST00000332814 CELF5Q8N6W0 485 aaKnown RBP17.31■□□□□ 0.36
C11orf88-201ENST00000332814 ANKRD52Q8NB46 1076 aa17.31■□□□□ 0.36
C11orf88-201ENST00000332814 TTC16Q8NEE8 873 aa17.31■□□□□ 0.36
C11orf88-201ENST00000332814 ZMIZ2Q8NF64 920 aa17.31■□□□□ 0.36
C11orf88-201ENST00000332814 KREMEN1Q96MU8 473 aa17.31■□□□□ 0.36
C11orf88-201ENST00000332814 BPIFA3Q9BQP9 254 aa17.31■□□□□ 0.36
C11orf88-201ENST00000332814 SLC2A4RGQ9NR83 387 aa17.31■□□□□ 0.36
C11orf88-201ENST00000332814 THG1LQ9NWX6 298 aaKnown RBP17.31■□□□□ 0.36
C11orf88-201ENST00000332814 OBP2AQ9NY56 170 aa17.31■□□□□ 0.36
C11orf88-201ENST00000332814 PTPRDP23468 1912 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 ZNF263O14978 683 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 PFKLP17858 780 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 HDCP19113 662 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 GDI1P31150 447 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 TPM4P67936 248 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 BST2Q10589 180 aaKnown RBP17.3■□□□□ 0.36
C11orf88-201ENST00000332814 CC2D1AQ6P1N0 951 aaPredicted RBP17.3■□□□□ 0.36
C11orf88-201ENST00000332814 GJB7Q6PEY0 223 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 POTEHQ6S545 545 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 GPIHBP1Q8IV16 184 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 SUGP1Q8IWZ8 645 aaKnown RBP17.3■□□□□ 0.36
C11orf88-201ENST00000332814 SCAMP5Q8TAC9 235 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 BPIFB1Q8TDL5 484 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 IRF7Q92985 503 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 PBXIP1Q96AQ6 731 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 PCMTD1Q96MG8 357 aaPredicted RBP17.3■□□□□ 0.36
C11orf88-201ENST00000332814 LSM14BQ9BX40 385 aaKnown RBP17.3■□□□□ 0.36
C11orf88-201ENST00000332814 PLA2G2FQ9BZM2 168 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 NACA2Q9H009 215 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 SMG9Q9H0W8 520 aaKnown RBP17.3■□□□□ 0.36
C11orf88-201ENST00000332814 TLR8Q9NR97 1041 aaKnown RBP17.3■□□□□ 0.36
C11orf88-201ENST00000332814 TDP1Q9NUW8 608 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 WNT16Q9UBV4 365 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 DNAJC12Q9UKB3 198 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 CA14Q9ULX7 337 aa17.3■□□□□ 0.36
C11orf88-201ENST00000332814 DOCK8Q8NF50 2099 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 C2orf78A6NCI8 922 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 ZNF840PA6NDX5 716 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 M0QYV0 167 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 O00370 1275 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 TNFRSF10BO14763 440 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 MED7O43513 233 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 PRAMEF12O95522 483 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 SETSIPP0DME0 302 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 BRD2P25440 801 aaKnown RBP17.29■□□□□ 0.36
C11orf88-201ENST00000332814 COPB1P53618 953 aaKnown RBP17.29■□□□□ 0.36
C11orf88-201ENST00000332814 RAPGEF1Q13905 1077 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 MFSD6LQ8IWD5 586 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 SIX5Q8N196 739 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 ARL14EPQ8N8R7 260 aaPredicted RBP17.29■□□□□ 0.36
C11orf88-201ENST00000332814 CSGALNACT1Q8TDX6 532 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 LRRC4Q9HBW1 653 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 ARHGEF3Q9NR81 526 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 GMIPQ9P107 970 aa17.29■□□□□ 0.36
C11orf88-201ENST00000332814 DOCK6Q96HP0 2047 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 NCANO14594 1321 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 STK25O00506 426 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 XPO1O14980 1071 aaKnown RBP17.28■□□□□ 0.36
C11orf88-201ENST00000332814 APBA1Q02410 837 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 ZNF268Q14587 947 aaPredicted RBP17.28■□□□□ 0.36
C11orf88-201ENST00000332814 ZSCAN23Q3MJ62 389 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 ARHGAP29Q52LW3 1261 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 GPRIN1Q7Z2K8 1008 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 PIGZQ86VD9 579 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 DNASE1L2Q92874 299 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 USP13Q92995 863 aaPredicted RBP17.28■□□□□ 0.36
C11orf88-201ENST00000332814 ASIC4Q96FT7 647 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 SHDQ96IW2 340 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 UBXN6Q9BZV1 441 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 C11orf16Q9NQ32 467 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 IL37Q9NZH6 218 aa17.28■□□□□ 0.36
C11orf88-201ENST00000332814 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
C11orf88-201ENST00000332814 HHLA1C9JL84 531 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 THAP12O43422 761 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 MBL2P11226 248 aaPredicted RBP17.27■□□□□ 0.36
C11orf88-201ENST00000332814 GNA15P30679 374 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 ZNF132P52740 706 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 PLCB2Q00722 1185 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 PDE4CQ08493 712 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 NCAPHQ15003 741 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 CNGA2Q16280 664 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 HECTD3Q5T447 861 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 LCLAT1Q6UWP7 414 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 TADA2BQ86TJ2 420 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 TTC30AQ86WT1 665 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 SIX6OS1Q8N1H7 587 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 FLCNQ8NFG4 579 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 UBA3Q8TBC4 463 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 TFAP2BQ92481 460 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 RSPRY1Q96DX4 576 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 CYP2S1Q96SQ9 504 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 LRFN3Q9BTN0 628 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 SIX2Q9NPC8 291 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 CHORDC1Q9UHD1 332 aaPredicted RBP17.27■□□□□ 0.36
C11orf88-201ENST00000332814 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.27■□□□□ 0.36
C11orf88-201ENST00000332814 CNTN6Q9UQ52 1028 aa17.27■□□□□ 0.36
C11orf88-201ENST00000332814 SCML2Q9UQR0 700 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms