RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FAM153BP0C7A2 387 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 FAM153CQ494X1 144 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 FOXR2Q6PJQ5 311 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 TMC7Q7Z402 723 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 NECAB2Q7Z6G3 386 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 LBHD1Q9BQE6 289 aaPredicted RBP16.64■□□□□ 0.25
PDGFB-201ENST00000331163 APOL5Q9BWW9 433 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 SLC24A3Q9HC58 644 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.64■□□□□ 0.25
PDGFB-201ENST00000331163 FAM153AQ9UHL3 310 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 A0A0U1RQF3 1178 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 SART1O43290 800 aaKnown RBP16.64■□□□□ 0.25
PDGFB-201ENST00000331163 BNIP3LO60238 219 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 IRF1P10914 325 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 TRADDQ15628 312 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 RAB6CQ53S08 254 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 OR2W6PQ8NHA6 318 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 TRIM11Q96F44 468 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 RAB6CQ9H0N0 254 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 TRPC7Q9HCX4 862 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 TBC1D13Q9NVG8 400 aa16.64■□□□□ 0.25
PDGFB-201ENST00000331163 UTP11Q9Y3A2 253 aaKnown RBP16.64■□□□□ 0.25
PDGFB-201ENST00000331163 WDR90Q96KV7 1748 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 TCRBV7S2A1N4TA0A589 114 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 M0QYT0 321 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 PRRG1O14668 218 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 PROZP22891 400 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 ANXA13P27216 316 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 PCSK1P29120 753 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 TKTP29401 623 aaKnown RBP16.63■□□□□ 0.25
PDGFB-201ENST00000331163 SULT1E1P49888 294 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 MAMLD1Q13495 774 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 FAM183BPQ6ZVS7 135 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 RBM23Q86U06 439 aaKnown RBP16.63■□□□□ 0.25
PDGFB-201ENST00000331163 CCDC26Q8TAB7 109 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 ZNF512Q96ME7 567 aaPredicted RBP16.63■□□□□ 0.25
PDGFB-201ENST00000331163 ULBP1Q9BZM6 244 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 SMPD4Q9NXE4 827 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 NR2E1Q9Y466 385 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 GOLGA6L10A6NI86 522 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 TRAPPC3O43617 180 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 FLT3P36888 993 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 PNPLA4P41247 253 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 TAS2R40P59535 323 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 DHX9Q08211 1270 aaKnown RBP16.63■□□□□ 0.25
PDGFB-201ENST00000331163 OSTM1Q86WC4 334 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 FAM172AQ8WUF8 416 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 PLEKHA5Q9HAU0 1116 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 DDIT4Q9NX09 232 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.63■□□□□ 0.25
PDGFB-201ENST00000331163 A0A0C4DFX4 3053 aa16.63■□□□□ 0.25
PDGFB-201ENST00000331163 DDHD2O94830 711 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 GZMAP12544 262 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 ATICP31939 592 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 CALCOCO2Q13137 446 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 CCDC121Q6ZUS5 278 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 SCAMP5Q8TAC9 235 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 TUSC3Q13454 348 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 MBTPS1Q14703 1052 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 FAM187BQ17R55 369 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 ZNF697Q5TEC3 545 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 PAPD7Q5XG87 772 aaKnown RBP16.62■□□□□ 0.25
PDGFB-201ENST00000331163 TXNRD3NBQ6F5E7 133 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 TRIM72Q6ZMU5 477 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 NT5DC3Q86UY8 548 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 CCDC89Q8N998 374 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 KLHDC9Q8NEP7 349 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 TBC1D31Q96DN5 1066 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 GOLGA8CPA6NN73 597 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 MDM4O15151 490 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 MEFVO15553 781 aaPredicted RBP16.62■□□□□ 0.25
PDGFB-201ENST00000331163 NBNO60934 754 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 MMRN1Q13201 1228 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 FAXCQ5TGI0 409 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 ERLEC1Q96DZ1 483 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 STIM2Q9P246 746 aa16.62■□□□□ 0.25
PDGFB-201ENST00000331163 CCDC78A2IDD5 438 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 LSP1P33241 339 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 RHOT1Q8IXI2 618 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 RSAD2Q8WXG1 361 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 MYLPFQ96A32 169 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 PCED1BQ96HM7 432 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 RPGRIP1Q96KN7 1286 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 CYP4F11Q9HBI6 524 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 TMPRSS4Q9NRS4 437 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 IP6K2Q9UHH9 426 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 STRIP2Q9ULQ0 834 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 FNDC3AQ9Y2H6 1198 aaKnown RBP16.61■□□□□ 0.25
PDGFB-201ENST00000331163 NR1D1P20393 614 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 SP100P23497 879 aaPredicted RBP16.61■□□□□ 0.25
PDGFB-201ENST00000331163 EPHB4P54760 987 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 UAP1Q16222 522 aaPredicted RBP16.61■□□□□ 0.25
PDGFB-201ENST00000331163 BTBD8Q5XKL5 378 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 MICALCLQ6ZW33 695 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 TTC30AQ86WT1 665 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 ANO9A1A5B4 782 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 TARSL2A2RTX5 802 aaKnown RBP16.61■□□□□ 0.25
PDGFB-201ENST00000331163 FAM189A1O60320 539 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 CST8O60676 142 aa16.61■□□□□ 0.25
PDGFB-201ENST00000331163 BEST1O76090 585 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms