RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 SIGLEC16A6NMB1 481 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 MIF4GDA9UHW6 222 aaKnown RBP18.98■□□□□ 0.63
SYNE4-201ENST00000324444 SART1O43290 800 aaKnown RBP18.98■□□□□ 0.63
SYNE4-201ENST00000324444 TCP1P17987 556 aaKnown RBP18.98■□□□□ 0.63
SYNE4-201ENST00000324444 TKTP29401 623 aaKnown RBP18.98■□□□□ 0.63
SYNE4-201ENST00000324444 RPL34P49207 117 aaKnown RBP18.98■□□□□ 0.63
SYNE4-201ENST00000324444 MAMLD1Q13495 774 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 LEXMQ3ZCV2 418 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 PTPN20Q4JDL3 420 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 CTXN3Q4LDR2 81 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 KIAA1841Q6NSI8 718 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 CEP57Q86XR8 500 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.98■□□□□ 0.63
SYNE4-201ENST00000324444 PCED1BQ96HM7 432 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 CPXM1Q96SM3 734 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 NCAPGQ9BPX3 1015 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 B3GNT5Q9BYG0 378 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 ZCWPW1Q9H0M4 648 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 OSGEPQ9NPF4 335 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 ANAPC7Q9UJX3 599 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 ATG2AQ2TAZ0 1938 aa18.98■□□□□ 0.63
SYNE4-201ENST00000324444 MYBPHLA2RUH7 354 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 NT5C1B-RDH14C9J2C7 533 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 ATP2C2O75185 946 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 URI1O94763 535 aaPredicted RBP18.97■□□□□ 0.63
SYNE4-201ENST00000324444 KRT3P12035 628 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 DNAJB1P25685 340 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 CREMQ03060 361 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 KRT17Q04695 432 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 CAMK1Q14012 370 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 PAPD7Q5XG87 772 aaKnown RBP18.97■□□□□ 0.63
SYNE4-201ENST00000324444 FAM35AQ86V20 835 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 DNAAF5Q86Y56 855 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 LRRC57Q8N9N7 239 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 SPPL3Q8TCT6 385 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 PABPC5Q96DU9 382 aaKnown RBP18.97■□□□□ 0.63
SYNE4-201ENST00000324444 MCRS1Q96EZ8 462 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 RTP3Q9BQQ7 232 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 GPR62Q9BZJ7 368 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 LRRC4Q9HBW1 653 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 ABCB6Q9NP58 842 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 BACE2Q9Y5Z0 518 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 SAR1BQ9Y6B6 198 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 PLXNA4Q9HCM2 1894 aa18.97■□□□□ 0.63
SYNE4-201ENST00000324444 H3BQ06 376 aaPredicted RBP18.96■□□□□ 0.63
SYNE4-201ENST00000324444 BUB1BO60566 1050 aaPredicted RBP18.96■□□□□ 0.63
SYNE4-201ENST00000324444 AP1G2O75843 785 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 FBXO21O94952 628 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 MAN1A1P33908 653 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 PIGHQ14442 188 aaPredicted RBP18.96■□□□□ 0.63
SYNE4-201ENST00000324444 ACAP1Q15027 740 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 RPS6KA1Q15418 735 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 CLUL1Q15846 466 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 CFAP221Q4G0U5 840 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 MEI1Q5TIA1 1274 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 VSTM1Q6UX27 236 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 ARCQ7LC44 396 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 XYLT1Q86Y38 959 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 FNIP1Q8TF40 1166 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 POF1BQ8WVV4 589 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 PPP2R3CQ969Q6 453 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 MYLPFQ96A32 169 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 PKMYT1Q99640 499 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 VN1R3Q9BXE9 311 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 CSNK1G1Q9HCP0 422 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 DMAP1Q9NPF5 467 aaPredicted RBP18.96■□□□□ 0.63
SYNE4-201ENST00000324444 KRT82Q9NSB4 513 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 CLDND1Q9NY35 253 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 RNF14Q9UBS8 474 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 HYOU1Q9Y4L1 999 aa18.96■□□□□ 0.63
SYNE4-201ENST00000324444 CES2O00748 559 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 HCRTO43612 131 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 SOD2P04179 222 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 UBE3AQ05086 875 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 HYAL1Q12794 435 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 COL19A1Q14993 1142 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 EFHC1Q5JVL4 640 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 KIAA0319Q5VV43 1072 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 OR6B2Q6IFH4 312 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 PMF1Q6P1K2 205 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 DDX53Q86TM3 631 aaKnown RBP18.95■□□□□ 0.62
SYNE4-201ENST00000324444 UBL4BQ8N7F7 174 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 OR10T2Q8NGX3 314 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 SPPL2BQ8TCT7 592 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 PIK3R5Q8WYR1 880 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 TRIM62Q9BVG3 475 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 HERC2P3Q9BVR0 1158 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 CYTH4Q9UIA0 394 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.95■□□□□ 0.62
SYNE4-201ENST00000324444 PCDHB5Q9Y5E4 795 aa18.95■□□□□ 0.62
SYNE4-201ENST00000324444 TCRBV5S1A1TA0A578 114 aa18.94■□□□□ 0.62
SYNE4-201ENST00000324444 TMEM191CA6NGB0 347 aa18.94■□□□□ 0.62
SYNE4-201ENST00000324444 E5RJQ4 531 aa18.94■□□□□ 0.62
SYNE4-201ENST00000324444 ATMINO43313 823 aaPredicted RBP18.94■□□□□ 0.62
SYNE4-201ENST00000324444 NCK2O43639 380 aa18.94■□□□□ 0.62
SYNE4-201ENST00000324444 ERBB2P04626 1255 aa18.94■□□□□ 0.62
SYNE4-201ENST00000324444 GLI1P08151 1106 aa18.94■□□□□ 0.62
SYNE4-201ENST00000324444 IRS1P35568 1242 aa18.94■□□□□ 0.62
SYNE4-201ENST00000324444 MAGEA11P43364 429 aa18.94■□□□□ 0.62
SYNE4-201ENST00000324444 SLC6A3Q01959 620 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms