RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CACNA2D1P54289 1103 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 DGUOKQ16854 277 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 ELOA2Q8IYF1 753 aaPredicted RBP17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 C10orf53Q8N6V4 93 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 UBASH3BQ8TF42 649 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 RNF146Q9NTX7 359 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 ALOX15P16050 662 aaPredicted RBP17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 CLEC4GQ6UXB4 293 aa17.45■□□□□ 0.38
SMCHD1-201ENST00000320876 SDR42E2A6NKP2 422 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 FXR1P51114 621 aaKnown RBP eCLIP17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 ATP6AP1LQ52LC2 224 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 HPS3Q969F9 1004 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 F8VZ95 297 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 TAF4O00268 1085 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 MTRF1O75570 445 aaKnown RBP17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 STIP1P31948 543 aaKnown RBP17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 C21orf59P57076 290 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 KRT74Q7RTS7 529 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 EID3Q8N140 333 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 NAT9Q9BTE0 207 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 PACSIN1Q9BY11 444 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 FEN1P39748 380 aaKnown RBP17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 ATP12AP54707 1039 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 ALG6Q9Y672 507 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 SPACA6W5XKT8 324 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 NR5A2O00482 541 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 AQP5P55064 265 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 SLC22A9Q8IVM8 553 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 MICALL2Q8IY33 904 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 POLD4Q9HCU8 107 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 RAD54BQ9Y620 910 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 ATMINO43313 823 aaPredicted RBP17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 CST8O60676 142 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 GSTM1P09488 218 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 CCT8P50990 548 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 FAM98BQ52LJ0 330 aaKnown RBP17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 DGKKQ5KSL6 1271 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 PCNX4Q63HM2 1172 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 LRRC74BQ6ZQY2 392 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 VPS33AQ96AX1 596 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 CAMKK2Q96RR4 588 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 TMEM120AQ9BXJ8 343 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 RPS6KL1Q9Y6S9 549 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 TRIM43BA6NCK2 446 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 BIRC5O15392 142 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 ATP5BP06576 529 aaKnown RBP17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 CHRM3P20309 590 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 QRICH1Q2TAL8 776 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 KCTD17Q8N5Z5 321 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 UBXN6Q9BZV1 441 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 MED14O60244 1454 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 UGGT1Q9NYU2 1555 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 MKRN4PQ13434 485 aaPredicted RBP17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 SHCBP1LQ9BZQ2 653 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 TMBIM4Q9HC24 238 aa17.44■□□□□ 0.38
SMCHD1-201ENST00000320876 CYP19A1P11511 503 aaPredicted RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 CACNB2Q08289 660 aaPredicted RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 FEZF2Q8TBJ5 459 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 DNAJC7Q99615 494 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 STK25O00506 426 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 AVPR1AP37288 418 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 OVGP1Q12889 678 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 LRRC71Q8N4P6 559 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 ZDHHC9Q9Y397 364 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 MFN2O95140 757 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 KRT6AP02538 564 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 LMBRD2Q68DH5 695 aaPredicted RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 YAF2Q8IY57 180 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 ZCCHC7Q8N3Z6 543 aaKnown RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 MYRFQ9Y2G1 1151 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 ALDH1A2O94788 518 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 FASP25445 335 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 DALRD3Q5D0E6 543 aaKnown RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 WASHC2DQ5SRD0 308 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 SLC25A41Q8N5S1 370 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 KLF6Q99612 283 aaPredicted RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 KDM6AO15550 1401 aaPredicted RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 PXDNLA1KZ92 1463 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 EXTL3O43909 919 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 GRAP2O75791 330 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 NMT1P30419 496 aaKnown RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 ATG16L2Q8NAA4 619 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 AAR2Q9Y312 384 aaKnown RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 RNF17Q9BXT8 1623 aaKnown RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 CCNG1P51959 295 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 MRNIPQ6NTE8 343 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 PMF1Q6P1K2 205 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 CINPQ9BW66 212 aaPredicted RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 KCTD10Q9H3F6 313 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 NCKIPSDQ9NZQ3 722 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 SKAP2O75563 359 aaPredicted RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 FYNP06241 537 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 MUTP22033 750 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 SV2CQ496J9 727 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 PIGUQ9H490 435 aa17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 PIN4Q9Y237 131 aaKnown RBP17.43■□□□□ 0.38
SMCHD1-201ENST00000320876 ZNF618Q5T7W0 954 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 RORBQ92753 470 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 PNKPQ96T60 521 aa17.42■□□□□ 0.38
SMCHD1-201ENST00000320876 ZSWIM1Q9BR11 485 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms