RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 METTL5Q9NRN9 209 aaKnown RBP18■□□□□ 0.47
SCAMP4-201ENST00000316097 LNPEPQ9UIQ6 1025 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 CNTNAP2Q9UHC6 1331 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 WDR91A4D1P6 747 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 FAM189A1O60320 539 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 KRT5P13647 590 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 BEX3Q00994 111 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 LMNB2Q03252 620 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 CCNG2Q16589 344 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 CLEC16AQ2KHT3 1053 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 PLEKHG4Q58EX7 1191 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 FYB2Q5VWT5 728 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 PPP1R12CQ9BZL4 782 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 CYLDQ9NQC7 956 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 LRCH1Q9Y2L9 728 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 KRT36O76013 467 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 CST3P01034 146 aaPredicted RBP17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 HLA-DRAP01903 254 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 SLC10A3P09131 477 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 KLRC2P26717 231 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 MBTD1Q05BQ5 628 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 OVGP1Q12889 678 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 CTC1Q2NKJ3 1217 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 MTHFD1LQ6UB35 978 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 C15orf39Q6ZRI6 1047 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 EMID1Q96A84 441 aaPredicted RBP17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 NT5C1BQ96P26 610 aa17.99■□□□□ 0.47
SCAMP4-201ENST00000316097 UMODL1Q5DID0 1318 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 SIGLEC16A6NMB1 481 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 SSTR3P32745 418 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 SLC18A1P54219 525 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 MCCD1P59942 119 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 ZNF484Q5JVG2 852 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 IQSEC1Q6DN90 963 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 OR52E8Q6IFG1 317 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 ZC3H18Q86VM9 953 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 TDRPQ86YL5 185 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 GLIS1Q8NBF1 620 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 PHC3Q8NDX5 983 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 NRG4Q8WWG1 115 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 SCG3Q8WXD2 468 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 OSBPL8Q9BZF1 889 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 SAR1AQ9NR31 198 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 SCOCQ9UIL1 159 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 TYROBPO43914 113 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 ZSCAN5DPP0CG00 497 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 PIK3CAP42336 1068 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 KPNB1Q14974 876 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 GRIK4Q16099 956 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 DGKDQ16760 1214 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 ZACNQ401N2 412 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 SPDYAQ5MJ70 313 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 ATF7IP2Q5U623 682 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 ZPBP2Q6X784 338 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 USP37Q86T82 979 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 RFWD2Q8NHY2 731 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 CPA5Q8WXQ8 436 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 MAK16Q9BXY0 300 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 FAM49AQ9H0Q0 323 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 FZD8Q9H461 694 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 APOBEC3GQ9HC16 384 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 SENP1Q9P0U3 644 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 WDR35Q9P2L0 1181 aa17.98■□□□□ 0.47
SCAMP4-201ENST00000316097 CFAP69A5D8W1 941 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 PMM2O15305 246 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 ZNF865P0CJ78 1059 aaPredicted RBP17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 CD58P19256 250 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 SLC1A1P43005 524 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 SSR1P43307 286 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 CLDN10P78369 228 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 ACSBG2Q5FVE4 666 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 MCOLN2Q8IZK6 566 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 ACKR2O00590 384 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 TNPO2O14787 897 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 CAPN9O14815 690 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 GAS2O43903 313 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 LDHAP00338 332 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 TROVE2P10155 538 aaKnown RBP eCLIP17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 SKIP12755 728 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 ABCD1P33897 745 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 POLE2P56282 527 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 TFDP1Q14186 410 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 HIC1Q14526 733 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 CEP128Q6ZU80 1094 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 ANKS1BQ7Z6G8 1248 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 DTX3LQ8TDB6 740 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 NLRP7Q8WX94 980 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 TTC25Q96NG3 672 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 MTMR12Q9C0I1 747 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 ARL8BQ9NVJ2 186 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 GJD2Q9UKL4 321 aa17.97■□□□□ 0.47
SCAMP4-201ENST00000316097 A0A0G2JND7 137 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 GPR25O00155 361 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 CCDC22O60826 627 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 KRT4P19013 534 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 ADRA1DP25100 572 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 GTF2H1P32780 548 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 TAS2R40P59535 323 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 KIZQ2M2Z5 673 aa17.96■□□□□ 0.47
SCAMP4-201ENST00000316097 LRRC74BQ6ZQY2 392 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms