RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PAMP19021 973 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 RPS12P25398 132 aaKnown RBP13.8□□□□□ -0.2
DDX54-201ENST00000306014 SPRP35270 261 aaPredicted RBP13.8□□□□□ -0.2
DDX54-201ENST00000306014 PTGIRP43119 386 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 USP10Q14694 798 aaKnown RBP13.8□□□□□ -0.2
DDX54-201ENST00000306014 LRRC74BQ6ZQY2 392 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 TRABD2AQ86V40 505 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 TMPRSS6Q8IU80 811 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 EME1Q96AY2 570 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 APOPT1Q96IL0 206 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 SLITRK1Q96PX8 696 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 DEFB129Q9H1M3 183 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 TMEM59LQ9UK28 342 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 STXBP5LQ9Y2K9 1186 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 RPS6KL1Q9Y6S9 549 aa13.8□□□□□ -0.2
DDX54-201ENST00000306014 PAEPP09466 180 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 PMLP29590 882 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 NUDT2P50583 147 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 PAPOLAP51003 745 aaKnown RBP13.79□□□□□ -0.2
DDX54-201ENST00000306014 STILQ15468 1287 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 ITPRIPL1Q6GPH6 555 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 ZCCHC23Q6ZST2 131 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 POU5F2Q8N7G0 328 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 CCDC138Q96M89 665 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 GLIS2Q9BZE0 524 aaPredicted RBP13.79□□□□□ -0.2
DDX54-201ENST00000306014 MYOZ2Q9NPC6 264 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 SAR1AQ9NR31 198 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 CDY2AQ9Y6F7 541 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 CDY1Q9Y6F8 540 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 DUOX1Q9NRD9 1551 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 GNGT2O14610 69 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 CSDE1O75534 798 aaKnown RBP13.79□□□□□ -0.2
DDX54-201ENST00000306014 IL18RAPO95256 599 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 CDH8P55286 799 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 SATB1Q01826 763 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 LRRC8EQ6NSJ5 796 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 ZDHHC24Q6UX98 284 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 FAM172AQ8WUF8 416 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 SLC5A4Q9NY91 659 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 CDK16Q00536 496 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 ECHDC2Q86YB7 292 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 WDR49Q8IV35 697 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 TTC8Q8TAM2 541 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 CNPY3Q9BT09 278 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 MRPL46Q9H2W6 279 aaKnown RBP13.79□□□□□ -0.2
DDX54-201ENST00000306014 C20orf96Q9NUD7 363 aaPredicted RBP13.79□□□□□ -0.2
DDX54-201ENST00000306014 ZDHHC18Q9NUE0 388 aa13.79□□□□□ -0.2
DDX54-201ENST00000306014 TPI1P60174 286 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 PTPN11Q06124 597 aaPredicted RBP13.78□□□□□ -0.2
DDX54-201ENST00000306014 BNIP1Q12981 228 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 TRMT5Q32P41 509 aaKnown RBP13.78□□□□□ -0.2
DDX54-201ENST00000306014 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 DCAF12L1Q5VU92 463 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 TWF2Q6IBS0 349 aaKnown RBP13.78□□□□□ -0.2
DDX54-201ENST00000306014 OR6P1Q8NGX9 317 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 USP33Q8TEY7 942 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 A1CFQ9NQ94 594 aaKnown RBP13.78□□□□□ -0.2
DDX54-201ENST00000306014 PIH1D1Q9NWS0 290 aaKnown RBP13.78□□□□□ -0.2
DDX54-201ENST00000306014 MAP3K20Q9NYL2 800 aaKnown RBP13.78□□□□□ -0.2
DDX54-201ENST00000306014 BAZ2AQ9UIF9 1905 aaKnown RBP13.78□□□□□ -0.2
DDX54-201ENST00000306014 MEI4A8MW99 385 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 APOEP02649 317 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 CLCN3P51790 818 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 PRAMEP78395 509 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 ANGEL2Q5VTE6 544 aaKnown RBP13.78□□□□□ -0.2
DDX54-201ENST00000306014 NIPA1Q7RTP0 329 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 RNF139Q8WU17 664 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 SLC39A10Q9ULF5 831 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 ARHGAP26Q9UNA1 814 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 FAM237BA0A1B0GVD1 139 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 MGRN1O60291 552 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 GLRA3O75311 464 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 MCF2P10911 925 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 TMEM62Q0P6H9 643 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 FLOT2Q14254 428 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 TBCCQ15814 346 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 AMHR2Q16671 573 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 UGCGQ16739 394 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 OTOAQ7RTW8 1153 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 METTL23Q86XA0 190 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 TEX2Q8IWB9 1127 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 C2orf69Q8N8R5 385 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 HIC2Q96JB3 615 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 AURKCQ9UQB9 309 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 ABHD2P08910 425 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 MIPP30301 263 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 SERPINB5P36952 375 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 CXCL9Q07325 125 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 TDRD10Q5VZ19 366 aaKnown RBP13.78□□□□□ -0.2
DDX54-201ENST00000306014 ACOT1Q86TX2 421 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 ALLCQ8N6M5 410 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 SMARCAD1Q9H4L7 1026 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 IRAK4Q9NWZ3 460 aa13.78□□□□□ -0.2
DDX54-201ENST00000306014 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
DDX54-201ENST00000306014 C19orf81C9J6K1 198 aa13.77□□□□□ -0.2
DDX54-201ENST00000306014 E7ENQ6 273 aa13.77□□□□□ -0.2
DDX54-201ENST00000306014 E9PBE3 544 aa13.77□□□□□ -0.2
DDX54-201ENST00000306014 KLHL41O60662 606 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms