RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 GCNT4Q9P109 453 aa12.79□□□□□ -0.36
HMGB2-201ENST00000296503 WNT16Q9UBV4 365 aa12.79□□□□□ -0.36
HMGB2-201ENST00000296503 CA14Q9ULX7 337 aa12.79□□□□□ -0.36
HMGB2-201ENST00000296503 NFE2L3Q9Y4A8 694 aa12.79□□□□□ -0.36
HMGB2-201ENST00000296503 TECTAO75443 2155 aa12.79□□□□□ -0.36
HMGB2-201ENST00000296503 KCNJ18B7U540 433 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 BEST1O76090 585 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 CD19P15391 556 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 PSMC3P17980 439 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 FCARP24071 287 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 TAF10Q12962 218 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 KCNJ12Q14500 433 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 MAN2A1Q16706 1144 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 TMEM270Q6UE05 265 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 HFE2Q6ZVN8 426 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 ARHGEF19Q8IW93 802 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 MFSD6LQ8IWD5 586 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 KAT5Q92993 513 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 JAKMIP2Q96AA8 810 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 TUBGCP2Q9BSJ2 902 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 BRD9Q9H8M2 597 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 UBE2TQ9NPD8 197 aaPredicted RBP12.78□□□□□ -0.36
HMGB2-201ENST00000296503 CHORDC1Q9UHD1 332 aaPredicted RBP12.78□□□□□ -0.36
HMGB2-201ENST00000296503 MYH10P35580 1976 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 PTPRDP23468 1912 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 SOBPA7XYQ1 873 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 AP5Z1O43299 807 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 TUBB4AP04350 444 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 SLC9A1P19634 815 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 GDI1P31150 447 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 PFKPQ01813 784 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 EXOC3L4Q17RC7 722 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 VWA3BQ502W6 1294 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 VITQ6UXI7 678 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 C11orf57Q6ZUT1 292 aaPredicted RBP12.78□□□□□ -0.36
HMGB2-201ENST00000296503 BMP8AQ7Z5Y6 402 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 SIX5Q8N196 739 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 TTC16Q8NEE8 873 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 SCAMP5Q8TAC9 235 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 FBXO32Q969P5 355 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 CYP2S1Q96SQ9 504 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 TTLL2Q9BWV7 592 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 DUSP16Q9BY84 665 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 SMG9Q9H0W8 520 aaKnown RBP12.78□□□□□ -0.36
HMGB2-201ENST00000296503 NDST4Q9H3R1 872 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 CSNK1G1Q9HCP0 422 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 SLC2A4RGQ9NR83 387 aa12.78□□□□□ -0.36
HMGB2-201ENST00000296503 TRAV19A0A0A6YYK7 116 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 KIF2AO00139 706 aaPredicted RBP12.77□□□□□ -0.37
HMGB2-201ENST00000296503 ZNF263O14978 683 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 TADA3O75528 432 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 PDGFBP01127 241 aaPredicted RBP12.77□□□□□ -0.37
HMGB2-201ENST00000296503 HDCP19113 662 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 RFX1P22670 979 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 WEE1P30291 646 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 PPP3CCP48454 512 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 SLC5A3P53794 718 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 SLC8A3P57103 927 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 GCNT1Q02742 428 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 TYRO3Q06418 890 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 TERF2Q15554 542 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 SGO2Q562F6 1265 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 PHLDB3Q6NSJ2 640 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 CLEC20AQ6ZU45 233 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 SUGP1Q8IWZ8 645 aaKnown RBP12.77□□□□□ -0.37
HMGB2-201ENST00000296503 KRT222Q8N1A0 295 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 CELF5Q8N6W0 485 aaKnown RBP12.77□□□□□ -0.37
HMGB2-201ENST00000296503 ZMIZ2Q8NF64 920 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 ZNF397Q8NF99 534 aaPredicted RBP12.77□□□□□ -0.37
HMGB2-201ENST00000296503 FLCNQ8NFG4 579 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 KIF18AQ8NI77 898 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 DEPDC1BQ8WUY9 529 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 TDP1Q9NUW8 608 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 TMEM51Q9NW97 253 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 COMMD8Q9NX08 183 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 KIAA1257Q9ULG3 409 aa12.77□□□□□ -0.37
HMGB2-201ENST00000296503 TRIOO75962 3097 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 C2orf78A6NCI8 922 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 TNFRSF10BO14763 440 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 CKMP06732 381 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 USP17L7P0C7H9 530 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 VDRP11473 427 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 NPR3P17342 541 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 EEF1GP26641 437 aaKnown RBP12.76□□□□□ -0.37
HMGB2-201ENST00000296503 SLC44A4Q53GD3 710 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 ARHGAP17Q68EM7 881 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 C17orf53Q8N3J3 647 aaPredicted RBP12.76□□□□□ -0.37
HMGB2-201ENST00000296503 FBXL6Q8N531 539 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 UBR7Q8N806 425 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 ARL14EPQ8N8R7 260 aaPredicted RBP12.76□□□□□ -0.37
HMGB2-201ENST00000296503 CCDC112Q8NEF3 446 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 IRF7Q92985 503 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 RSPRY1Q96DX4 576 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 TSPYL1Q9H0U9 437 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 FBXO44Q9H4M3 255 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 FANCLQ9NW38 375 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 THG1LQ9NWX6 298 aaKnown RBP12.76□□□□□ -0.37
HMGB2-201ENST00000296503 HESX1Q9UBX0 185 aa12.76□□□□□ -0.37
HMGB2-201ENST00000296503 ZNF840PA6NDX5 716 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms